add git lfs

.devcontainer/devcontainer.json

@@ -5,6 +5,7 @@
     "onCreateCommand": "bash .devcontainer/setup_container.sh",
     "features": {
         "ghcr.io/devcontainers/features/git:1": {},
+        "ghcr.io/devcontainers/features/git-lfs:1": {},
         "ghcr.io/devcontainers/features/github-cli:1": {},
         "ghcr.io/devcontainers/features/docker-in-docker:2": {},
         "ghcr.io/devcontainers-contrib/features/apt-get-packages:1": {},
@@ -18,6 +19,7 @@
             "extensions": [
                 "GitHub.vscode-pull-request-github",
                 "ms-azuretools.vscode-docker",
+                "ms-python.python",
                 "ms-python.isort",
                 "ms-python.vscode-pylance",
                 "ms-vscode.cmake-tools",

.gitattributes

@@ -10,6 +10,35 @@
 # Force bash scripts to always use LF line endings so that if a repo is accessed
 # in Unix via a file share from Windows, the scripts will work.
 *.sh text eol=lf
+# Git LFS settings            #
+# All test data gets squished in lfs
+.test_data/**/* filter=lfs diff=lfs merge=lfs -text
+# Neuroimaging data
+*.nii filter=lfs diff=lfs merge=lfs -text
+*.nii.gz filter=lfs diff=lfs merge=lfs -text
+*.trk filter=lfs diff=lfs merge=lfs -text
+*.tck filter=lfs diff=lfs merge=lfs -text
+*.fib filter=lfs diff=lfs merge=lfs -text
+*.vtk filter=lfs diff=lfs merge=lfs -text
+# Archives
+*.7z filter=lfs diff=lfs merge=lfs -text
+*.br filter=lfs diff=lfs merge=lfs -text
+*.gz filter=lfs diff=lfs merge=lfs -text
+*.tar filter=lfs diff=lfs merge=lfs -text
+*.zip filter=lfs diff=lfs merge=lfs -text
+# Documents
+*.pdf filter=lfs diff=lfs merge=lfs -text
+# Images
+*.gif filter=lfs diff=lfs merge=lfs -text
+*.ico filter=lfs diff=lfs merge=lfs -text
+*.jpg filter=lfs diff=lfs merge=lfs -text
+*.png filter=lfs diff=lfs merge=lfs -text
+*.psd filter=lfs diff=lfs merge=lfs -text
+*.webp filter=lfs diff=lfs merge=lfs -text
+# Fonts
+*.woff2 filter=lfs diff=lfs merge=lfs -text
+# Other
+*.exe filter=lfs diff=lfs merge=lfs -text
 .test_data/**/cropvolume* filter=lfs diff=lfs merge=lfs -text
 .test_data/**/fslbetcrop* filter=lfs diff=lfs merge=lfs -text
 .test_data/**/nlmeans* filter=lfs diff=lfs merge=lfs -text