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1. abawaca abawaca Public

   abawaca is a binning program for metagenomics

   C++ 13 2

2. Lola Lola Public

   Code for the prgram Lola

   Perl 2

3. Goodies Goodies Public

   Perl scripts and small C++ programs I find useful for analyzing DNA sequencing data

   Perl 1

4. synteny synteny Public

   Code for the program synteny

   UnrealScript 1

5. compare-sets compare-sets Public

   The program compares two sets of DNA sequences (provided as FASTA files) and returns the percent of sequences in each set that align to sequences in the other set. It also provides alignment inform…

   Perl 1 1

6. SNPs SNPs Public

   SNPs computes base calls for every position on the input sequences (fasta) and reads aligned to them (SAM)

   C++