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Starred repositories

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Janus-Series: Unified Multimodal Understanding and Generation Models

Python 12,497 1,468 Updated Jan 28, 2025

Code for performing adversarial attacks on atomistic systems using NN potentials

Python 35 9 Updated Oct 3, 2022
Python 3 Updated Dec 18, 2024

Martignac: computational workflows for the Martini force field

Python 7 Updated Nov 28, 2024

CREST - A program for the automated exploration of low-energy molecular chemical space.

Fortran 213 45 Updated Jan 29, 2025

A python package for chemical space visualization.

Jupyter Notebook 135 31 Updated Dec 17, 2024

🧡 Follow your favorites in one inbox

TypeScript 22,216 926 Updated Jan 29, 2025

byteff source code

Python 49 10 Updated Jan 17, 2025

Official implementation of MatterGen -- a generative model for inorganic materials design across the periodic table that can be fine-tuned to steer the generation towards a wide range of property c…

Python 938 114 Updated Jan 30, 2025

This is repository to reproduce simulations and plots of our LJ solvent modeling paper (submitted to AICHE Journal, 2024 Futures)

1 Updated Aug 30, 2024

An Integrated VMD Graphical User Interface for Molecular Packing

Tcl 17 2 Updated Dec 28, 2024
Jupyter Notebook 4 2 Updated Jul 12, 2021

LAMMPS package for extensional flow fields

C++ 9 3 Updated Aug 8, 2018

Molecular Property Prediction using GP with a SOAP kernel

Python 21 9 Updated Nov 16, 2020

Automated force-field parameterization software

Python 8 1 Updated Feb 6, 2023

Transformer creation from scratch using Jax.

Jupyter Notebook 12 Updated Dec 8, 2024

This repository contains simulation code and numerical results presented in my article "Variational time reversal for free energy estimation in nonequilibrium steady states" with Prof. David T. Lim…

Python 1 Updated Jun 11, 2024

Unified machine learning model for predicting polymer properties through human language instructions

HTML 14 4 Updated Jan 11, 2024
Python 1 1 Updated Oct 1, 2024

Quantifying Pairwise Chemical Similarity for Polymers

Jupyter Notebook 13 1 Updated Jan 23, 2024

MacroSimGNN: Graph neural network approach for fast and accurate calculation of macromolecule similarity

Jupyter Notebook 3 1 Updated Jan 6, 2025

MacroSimGNN: Graph neural network approach for fast and accurate calculation of macromolecule similarity

Jupyter Notebook 4 Updated Dec 24, 2024

Python wrapper for the PubChem PUG REST API.

Python 414 110 Updated Apr 12, 2024

Python API for NIST Chemistry WebBook

Python 33 6 Updated Sep 28, 2024

A CNN approach for re-inserting atomistic detail to CG configurations

Jupyter Notebook 4 Updated Aug 31, 2024

A code to generate atomic structure with symmetry

Python 290 71 Updated Jan 28, 2025

LJ_crystal

1 Updated Jan 10, 2025

Polymer field theories with Complex Langevin Dynamics in Python

Python 2 Updated Nov 4, 2024
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