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Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Robust, flexible and resource-efficient pipelines using Go and the commandline
A tutorial for using git-annex to shared large datasets and code within the Lab.
Nextflow Alignment Pipeline - from fastq.gz to sorted bam with ease
Writing an OS in 1,000 lines.
An MS Word macro that links author-date or number style citations of Zotero to their bibliography entry.
Repository with documentation file of our Jan 22-24 workshop on Computational Population Genetics in Jena, Germany.
Programs to analyse NGS data for population genetics purposes
A wikilink extension for Python Markdown
flake8 plugin for ignoring specific error at file level
All the resources I wish I knew when starting my PhD. This repository is aimed to be a living, constantly developing resource where everybody can contribute with new resources!
Scientific Inkscape: Inkscape extensions for figure resizing and editing
Tool for quick offline batch conversion of Genbank IDs or accessions to taxonomy strings
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
Want a new ZIM file? Propose ZIM content improvements or fixes? Here you are!
LibreOffice/OpenOffice.org extension to expand animations before exporting to PDF. Looking for maintainers.
template, example, and instructions on how to make an a priori phylogenetic protocol
Script to calculate the normalized compression distance of sets of files. It also tries to parallize the work over the available processors.
This is a fork of the original INDELible (Fletcher and Yang, 2009), a simulator of biological evolution. Now allowing the use of a sequence as ancestral.
Tutorials on phylogenetic and phylogenomic inference
Finally decent dictionaries based on the Wiktionary for your beloved eBook reader. Daily updates & 15 locales supported so far.
Pyzotero: a Python client for the Zotero API