R Markdown Résumés and CVs

A list of scRNA-seq analysis tools

Publication-quality sequence logos in R

A collection of scripts and notes related to genomics and bioinformatics

Support for blend modes in ggplot2

Scripts to analyze TCGA data

My code on tidy tuesday visualisations (twitter: @toeb18)

an R/Shiny application for interactive creation of non-circular plots of whole genomes

Integrative analysis of structural variations.

Statistically Significant loops from HiChIP data

Code to some visualizations of data that I found interesting and posted on twitter (@toeb18)

Benchmarking long-read RNA-seq analysis tools

Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec

A “data light” TF-network mapping algorithm using only gene expression and genome sequence data.

Shape Changes In Selecting Sample Outliers in RNA-seq

Códigos de algumas visualizações de dados

🎸 Rocking R at UMCCR

snakmeke pipeline to precess scNanoHi-C data

Scripts for .bed file genomic region annotation with various tools

Scripts for ChIA-drop data analysis

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/diffloop.html Contributions: https://github.com/aryeelab/diffloop. …

Utility scripts related to IKAROS manuscript

Code associated with Ravid Lustig et al, Nat Cell Biol, 2023