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1. 3prime-tag-seq 3prime-tag-seq Public

   Snakemake pipeline for processing 3' tag RNA-seq data.

   Python

2. BioHPC_SNP_calling BioHPC_SNP_calling Public

   From fastq to vcf, using Trimmomatic, bwa mem, and GATK tools.

   Shell 1

3. nglmr_SV nglmr_SV Public

   Snakemake pipeline for structural variant calling from Nanopore long reads using NGLMR for mapping and Sniffles for variant calling.

   Python 2 1