v1.1.0

What's Changed

Updates

• Setting batch job paths by @Lars-DHondt-KUL in #155
• Implementing synergies by @miriamfebrer in #158
• Add example scripts by @Lars-DHondt-KUL in #160
• Add scaling of ligaments by @Lars-DHondt-KUL in #166

Documentation

• Update README.md by @VDB-Bram in #159
• Documentation model by @Lars-DHondt-KUL in #161
• Update README.md - link guidelines for contributing by @Lars-DHondt-KUL in #169

Bugfixes

• bugfix-get_git_hash by @Lars-DHondt-KUL in #156
• fix typo by @VDB-Bram in #165
• Update README.md: dependencies by @Lars-DHondt-KUL in #167
• remove hamner_modified model by @VDB-Bram in #172
• bugfix missing frame mot file by @VDB-Bram in #171
• Bugfix identify kinematic chains by @Lars-DHondt-KUL in #168

Full Changelog: v1.0.0...v1.1.0

v1.0.0

If you are familiar with a previous version of this simulation framework, here is a rundown of the changes:

In general, hard coded variables were removed as much as possible and put in a settings structure the user can adapt. This results in:

• More easily use a different model (other number of joints or muscles)
• Make input-output a bit easier
• More easily change the (musculoskeletal) parameters of the simulation

Besides that, the code was also adapted in accordance with recent (October 2020) adjustments in the original repository of Falisse et al.

• Adjusted version of the collocation scheme (now really being an orthogonal radau scheme)
• Support for parallel computing
• Formulation with opti

Lastly, seperate pieces of code were put together to streamline performing predictive simulations:

• Automatic conversion of an OpenSim model to the external function (executable called from the workflow)
• Performing Muscle Analysis and polynomial fitting (integrated into the workflow)