Adaption of DINO for computational pathology

Apache Parquet Java

Prov-GigaPath: A whole-slide foundation model for digital pathology from real-world data

SimCLRv2 - Big Self-Supervised Models are Strong Semi-Supervised Learners

A graph-transformer for whole slide image classification

modular & open DIA search

Open source tools for computational pathology - Nature BME

A diaPASEF spectrum-centric analysis tool

KD-Tree Implementation in Java via http://www.cs.wlu.edu/~levy/software/kd/

Geo Assist is a spatial library to manage spatial data in-memory.

The modern Java bytecode editor

Java class to draw a heat map in a JPanel

The detection of peaks and valleys in a 1d-vector or 2d-array (image)

The official repository for ROOT: analyzing, storing and visualizing big data, scientifically

The repository for Targeted Feature Detection and Extraction (TFD/E).

A large collection of JavaFX examples demonstrating basic + advanced features of JavaFX.

Framework-agnostic implementation for state-of-the-art saliency methods (XRAI, BlurIG, SmoothGrad, and more).

Neural network visualization toolkit for tf.keras

Apply transfer learning of EfficientNet to a custom regression problem with Keras and TensorFlow 2.

An implementation of Grad-CAM with keras

pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning

Advanced AI Explainability for computer vision. Support for CNNs, Vision Transformers, Classification, Object detection, Segmentation, Image similarity and more.

Color palette package in R inspired by works at the Metropolitan Museum of Art in New York

Java bindings for TensorFlow

A fast and easy to use linear algebra library written in Java for dense, sparse, real, and complex matrices.

The missing Java distribution of native C++ libraries

CLAHE (Contrast Limited Adaptive Histogram Equalization)

common method to enhance some cbct image

Fast and flexible image augmentation library. Paper about the library: https://www.mdpi.com/2078-2489/11/2/125