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@LMSBioinformatics

LMSBioinformatics

The Bioinformatics Facility at the MRC Laboratory of Medical Sciences

:octocat: Over 10 years of open science on GitHub 🔬 Integrative advice and assistance with data analysis 🖥️ High performance computing and pipeline development 📈 Software and database development 🎓 Training and mentoring

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  1. Introduction_to_R Public

    A 5 module 'Introduction to R' course and accompanying data resources

    HTML 1

Repositories

Showing 10 of 16 repositories
  • rstudio_manager Public

    launch and manage RStudio servers as HPC jobs

    Python 0 MIT 0 0 0 Updated Jan 14, 2025
  • jupyter_manager Public

    Launch and manage Jupyter servers as HPC jobs

    Python 0 MIT 0 0 0 Updated Dec 19, 2024
  • nf_qc Public

    Nextflow QC pipeline

    Nextflow 0 MIT 0 0 0 Updated Dec 18, 2024
  • nf_mod_utils Public

    Nextflow utilities submodule

    Nextflow 0 MIT 0 0 0 Updated Dec 18, 2024
  • rstudio_image Public

    Dockerfile for the LMS RStudio image, building on rocker/rstudio

    0 MIT 0 0 0 Updated Dec 18, 2024
  • af_plotter Public

    Generate pLDDT plots and PAE heatmaps from AlphaFold3 JSONs

    Python 1 MIT 0 0 0 Updated Dec 17, 2024
  • Introduction_to_R Public

    A 5 module 'Introduction to R' course and accompanying data resources

    HTML 1 MIT 0 0 0 Updated Oct 31, 2024
  • spack Public Forked from spack/spack

    A flexible package manager that supports multiple versions, configurations, platforms, and compilers.

    Python 0 2,357 0 0 Updated Oct 16, 2024
  • nf_mod_fastqc Public

    Nextflow fastqc module

    Nextflow 0 MIT 0 0 0 Updated Oct 1, 2024
  • nf_mod_sourmash Public

    Nextflow sourmash module

    Nextflow 0 MIT 0 0 0 Updated Sep 19, 2024

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