Add missing parens on indent guide check

Previously the indent guide was always showing on the whitespace only lines

Closes atom#2274

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Resolve path to apm

Refs atom#1936

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Exclude EditorViews that are mini editors from WorkspaceView::eachEdi…

…torView

Fixes atom#1900

Only autoscroll selections in the model when managing scroll position

Update to apm 0.40.0

Merge pull request atom#1871 from atom/cj-remove-deprecated-calls

Remove deprecated calls

Prepare 0.88.0 release

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