Meant for kids aged 10-16. Less about Python syntax and more about inspiring kids towards programming.

tools for working with genome variation graphs

A comprehensive cancer DNA/RNA analysis and reporting pipeline

R Package: Parallel Distance Matrix Computation using Multiple Threads

Create celltype-specific gene signatures based on expression data using a rank-based approach

ClinVar aggregates information about genomic variation and its relationship to human health. Contact us at '[email protected]' with any questions or comments.

Bostongene cell deconvolution algorithm from RNAseq

Structural variant toolkit for VCFs

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

The Platinum Genomes Truthset

scripts and notebooks from sanbomics

DRAGEN open-source mapper

Public analysis repository for the SMARTrial

🤗 AutoTrain Advanced

MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

𝐠𝐠𝐯𝐨𝐥𝐜 effortlessly translates differential expression datasets and RNAseq data into informative volcano plots. Highlight genes of interest with unprecedented ease. With just a single line of code,…

Collection of Artificial Intelligence projects.

✂️ Deep learning-based splice site predictor that improves spliced alignments

Significance analysis for clustering single-cell RNA-sequencing data

Snakemake-based workflow for detecting structural variants in genomic data

A curated list of awesome Bioinformatics libraries and software.

an API for intersections of genomic data

Deep Learning based variant calling toolkit - https://clara-parabricks.github.io/VariantWorks/

R tools to interact with hap.py output

Customizable workflows based on snakemake and python for the analysis of NGS data

A snakemake workflow for benchmarking variant calling approaches with Genome in a Bottle (GIAB), CHM (syndip) or other custom datasets