Particle Populations in Flow

A cython instantiation of the algorithm discussed in

Pigolotti S. et al. Growth, competition and cooperation in spatial population genetics. Theoretical Population Biology (2013), 84C, 72–86. https://doi.org/10.1016/j.tpb.2012.12.002

Currently, an arbitrary number of populations with differing growth rates compete to eat nutrients while they are advected by fluid flow.

To install, use

python setup.py develop

Installation requires Cython and CythonGSL (you can install CythonGSL with pip).

See the examples folder for ipython notebooks showing how to use the code.