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  • copier Public

    Copier template for working with Python and Poetry

    Jinja MIT License Updated Feb 10, 2025
  • Docker for dcm2niix

    Dockerfile 1 MIT License Updated Dec 19, 2024
  • slurmpie Public

    A python package to interact with slurm

    Python MIT License Updated Nov 6, 2024
  • Predicting genetics and providing segmentation of glioma

    Python 17 1 Apache License 2.0 Updated Aug 13, 2024
  • canvasapi Public

    Forked from ucfopen/canvasapi

    Python API wrapper for Instructure's Canvas LMS. Easily manage courses, users, gradebooks, and more.

    Python MIT License Updated Aug 11, 2024
  • Bleeding edge cookiecutter template to create new python packages

    Jinja MIT License Updated Jul 22, 2024
  • Python 6 4 Other Updated Jan 25, 2024
  • PREDICT Public

    Python 1 Apache License 2.0 Updated Oct 3, 2023
  • dcm2niixpy Public archive

    Python 2 MIT License Updated Feb 22, 2023
  • BibClean Public archive

    Clean-up bibtex and biblatex files

    Python MIT License Updated Feb 21, 2023
  • Docker for NNunet with task 001 and task 082 models

    Dockerfile Updated Nov 7, 2022
  • Docker for the Brats2020 scan20 submission

    Python GNU General Public License v3.0 Updated Nov 2, 2022
  • prognosais Public archive

    Python 5 Apache License 2.0 Updated Sep 26, 2022
  • HD-GLIO Public

    Forked from CCI-Bonn/HD-GLIO

    Automated deep-learning based brain tumor segmentation on MRI

    Python Apache License 2.0 Updated Aug 24, 2022
  • Tool to download the data from the Erasmus Glioma Database

    Python Apache License 2.0 Updated Apr 26, 2022
  • PhDThesis Public

    LaTeX code for my PhD thesis

    TeX 9 MIT License Updated Oct 11, 2021
  • :octocat: GitHub Action to compile LaTeX documents

    Shell MIT License Updated Jun 9, 2021
  • Dockers that run on XNAT

    Dockerfile Apache License 2.0 Updated Feb 18, 2021
  • Docker files for biomedical applications

    Dockerfile MIT License Updated Jan 22, 2021
  • Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix

    Python Updated Jan 13, 2021
  • Examples of prognosais

    Python Apache License 2.0 Updated Nov 6, 2020
  • Action to check a bib file using biber

    Shell MIT License Updated Oct 30, 2020
  • A Github action to lint a LaTeX file for style and formatting issues.

    Shell Updated Mar 13, 2020
  • Shell 6 4 MIT License Updated Feb 12, 2020
  • OpenPC Public

    An open source multi-element generalized polynomial chaos toolbox for matlab

    MATLAB 9 6 MIT License Updated Nov 30, 2018
  • Tools to use for the Cartesius GPU cluster

    Shell 1 1 GNU General Public License v3.0 Updated Nov 20, 2018
  • Code used to process 1p19q data from TCIA

    Python 1 Updated Sep 18, 2018