debug python dependency

THUNLP-MT · Dec 26, 2022 · f039994 · f039994
1 parent 9db81f7
commit f039994
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Showing 2 changed files with 4 additions and 4 deletions.
diff --git a/scripts/prepare_data_rabd.sh b/scripts/prepare_data_rabd.sh
@@ -23,7 +23,7 @@ echo "Summary file at ${SUMMARY}. SAbDab file at ${SABDAB}. PDB folder at ${PDB_
 ALL=${DATA_DIR}/rabd_all.json
 
 # download data
-python data/download.py \
+python -m data.download.py \
     --summary ${SUMMARY} \
     --pdb_dir ${PDB_DIR} \
     --fout ${ALL} \
@@ -45,7 +45,7 @@ do
     python data/split.py \
         --data ${SABDAB} \
         --rabd ${ALL} \
-		--out_dir ${PROCESS_DIR} \
+        --out_dir ${PROCESS_DIR} \
         --valid_ratio 0.1 \
         --cdr ${CDR} \
         --filter 111

diff --git a/scripts/prepare_data_skempi.sh b/scripts/prepare_data_skempi.sh
@@ -25,7 +25,7 @@ ALL=${DATA_DIR}/skempi_all.json
 # the handling logic is mostly the same as rabd
 
 # download data
-python data/download.py \
+python -m data.download.py \
     --summary ${SUMMARY} \
     --pdb_dir ${PDB_DIR} \
     --fout ${ALL} \
@@ -50,4 +50,4 @@ python data/split.py \
 # process
 python data/dataset.py --dataset ${DATA_DIR}/skempi_all.json
 python data/dataset.py --dataset ${DATA_DIR}/valid.json
-python data/dataset.py --dataset ${DATA_DIR}/train.json
+python data/dataset.py --dataset ${DATA_DIR}/train.json