We are from Thomas Yeo's Computational Brain Imaging Group (CBIG).
CBIG repository is a package that provides the following useful tools:
- fMRI preprocessing pipeline
- Brain parcellations and algorithms
- Mental disorder subtyping maps and algorithms
- fMRI dynamical models (including neural mass models)
- Registration between MNI and fsaverage space
- Phenotypic prediction algorithms
For more info, please check stable_projects folder.
Currently, CBIG mainly uses matlab, bash, csh, python and only supports Linux system.
After cloning/downloading this repository, please see README inside setup directory to see instructions on how to set up your local environment to be compatible with our repository.
We strongly encourage you to join the CBIG users group (https://groups.google.com/forum/#!forum/cbig_users/join), so that you can be informed about major updates & bugs.
If you have issues, please email the CBIG users group. Do not post on the public repo issues page because we do not check it frequently (since we have a private github repo that keeps track of issues). We will try our best to answer your questions, but we have limited resources to provide support.
See our LICENSE file for license rights and limitations (MIT).
Happy researching!
