TomKellyGenetics
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MultilayerGraphs.jl Public
Forked from JuliaGraphs/MultilayerGraphs.jlA Julia package for the creation, manipulation and analysis of the structure, dynamics and functions of multilayer graphs.
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GBS-TaFFE Public
Forked from AgResearch/GBS-TaFFEAnalysing RE-RRSeq with GTDB taxonomic framework
Python MIT License UpdatedSep 24, 2024 -
vioplot Public
Development version of vioplot R package (CRAN maintainer)
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tktools Public
Personal Repository of functions, tools, tweaks, aliases, and settings. R functions documented in package.
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leiden Public
Implementation of the Leiden algorithm called by reticulate in R. (CRAN)
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universc Public
Forked from minoda-lab/universcUniverSC: a flexible cross-platform single-cell data processing pipeline
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hicup-plus Public
Forked from Kelly-ST-HRI/hicup-plusHi-C data processing pipeline (with Dragen and HiSAT2 aligners)
Perl GNU Lesser General Public License v3.0 UpdatedNov 8, 2023 -
hello-github Public
Evidence that GitHub contributions are a worthless measure of programming competency or work ethic
R MIT License UpdatedAug 7, 2023 -
❗ This is a read-only mirror of the CRAN R package repository. Rmpi — Interface (Wrapper) to MPI (Message-Passing Interface). Homepage: http://fisher.stats.uwo.ca/faculty/yu/Rmpi/
R UpdatedFeb 28, 2023 -
scrnaseq Public
Forked from nf-core/scrnaseqA single-cell RNAseq pipeline for 10X genomics data
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❗ This is a read-only mirror of the CRAN R package repository. snow — Simple Network of Workstations
R UpdatedFeb 21, 2023 -
nf-core-modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
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Gviz Public
Forked from ivanek/GvizThis is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.
R Artistic License 2.0 UpdatedFeb 6, 2023 -
seurat Public
Forked from satijalab/seuratR toolkit for single cell genomics
R GNU General Public License v3.0 UpdatedFeb 5, 2023 -
rtracklayer Public
Forked from lawremi/rtracklayerR interface to genome annotation files and the UCSC genome browser
C Other UpdatedDec 26, 2022 -
rockstar Public
Forked from RockstarLang/rockstarThe Rockstar programming language specification
JavaScript MIT License UpdatedOct 21, 2022 -
graphsim Public
R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)
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dropSeqPipe Public
Forked from Hoohm/dropSeqPipeA SingleCell RNASeq pre-processing snakemake workflow
Python Creative Commons Attribution Share Alike 4.0 International UpdatedMay 27, 2022 -
.github Public
Forked from nf-core/.githubFiles for the @nf-core GitHub organisation
MIT License UpdatedMay 13, 2022 -
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zUMIs Public
Forked from sdparekh/zUMIszUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs
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cellranger Public
Forked from mckinsel/cellranger10x Genomics Single Cell 3' Gene Expression and VDJ Assembly
Python Other UpdatedNov 5, 2021 -
cellranger_clean Public
Forked from mckinsel/cellranger_clean10x Cell Ranger Docker Image
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i18n Public
Forked from carpentries-i18n/i18nWhere all the translations are controlled from.
Shell UpdatedAug 11, 2021 -
bioc-rnaseq-ja Public
repository created automatically based on translations. Please submit Issues and PRs to https://github.com/swcarpentry-ja/i18n
UpdatedAug 10, 2021 -
bioc-rnaseq Public
Forked from swcarpentry-ja/bioc-rnaseqAnalysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
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assessment-archives Public
Forked from swcarpentry-ja/assessment-archivesAn archive of all the versions of the Carpentries surveys
R UpdatedJul 29, 2021 -
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atac-seq-pipeline Public
Forked from ENCODE-DCC/atac-seq-pipelineENCODE ATAC-seq pipeline
Python MIT License UpdatedJun 12, 2021 -
carpentries-coc Public
Forked from kozo2/docs.carpentries.orgCommunity Documentation for the Carpentries
Python Other UpdatedApr 28, 2021