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  • SPOT-BGC Public

    A Snakemake Pipeline to Output meTagenomics-derived Biosynthetic Gene Clusters

    Shell MIT License Updated Jan 29, 2025
  • Benchmarking scripts for orthologous clustering programs

    Python MIT License Updated Mar 16, 2024
  • Material for the Phylogenetics module of BBT045, in Python as of 2024

    HTML MIT License Updated Feb 20, 2024
  • The sysbio.se source code

    CSS MIT License Updated Apr 18, 2023
  • GitHub repository for teaching materials prepared for Phylogenomics section of Applied BIoinformatics (BBT045)

    R 1 MIT License Updated Feb 14, 2023
  • LearningR Public

    Repository made during "Reproducible Research in R" course: https://gitlab.com/rostools/r-cubed

    R Updated Jan 18, 2023
  • Reproducible workflow for my MSc Thesis project: "Comparing the efficacy of algorithmic approaches to the functional annotation of proteins in Trichomonad parasites"

    Python 1 MIT License Updated Sep 29, 2022
  • Repository for GitHub Pages

    Updated Mar 19, 2022
  • A sampling of useful scripts I've written as part of my MSc Thesis work, that I have chosen to post publicly prior to the completion of my Thesis project.

    Python 1 MIT License Updated Mar 19, 2022
  • GPS_Py Public

    Adaptation into Python and extension of the GPS program by Homolog.us (https://github.com/homologus/GPS)

    Python MIT License Updated Mar 20, 2021
  • Remote repository for BINP29 git exercise

    Updated Feb 23, 2021
  • Repository for working, good quality scripts written for my MSc program

    Python 1 Updated Feb 23, 2021
  • Python script for performing a number of analyses on an input FASTA file

    Python MIT License Updated Jan 30, 2021
  • Python program for parsing NCBI BLASTp results

    Python MIT License Updated Jan 30, 2021
  • Demonstration repository for the Python course given to the Bioinformatic's masters programme

    Python Updated Oct 12, 2020