A curated list of awesome Bioinformatics libraries and software.

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

The coronavirus dataset

Backup of my dotfiles.

Your shell good as hell ! Not just dotfiles.

Robs manual for the computational genomics and bioinformatics class.

Acche din aa gaye

troposphere - Python library to create AWS CloudFormation descriptions

🎨 A curated list of delightful VS Code packages and resources.

An R-focused pipeline toolkit for reproducibility and high-performance computing

A list of awesome beginners-friendly projects.

🤖 An open source chat-ops bot framework

List of software/websites/databases/other stuff for genome engineering

Organize your project into a research website

A curated list of awesome command-line frameworks, toolkits, guides and gizmos. Inspired by awesome-php.

Packrat is a dependency management system for R

Lime: Explaining the predictions of any machine learning classifier

Creating a virtual cluster on demand in an OpenStack environment including a UNICORE instance.

Conda recipes for the bioconda channel.

Jupyter Notebook & Data Associated with my Tutorial video on the Python NumPy Library

Jupyter Notebook and Python business intelligence tools and techniques. [Raw upload]

Examples of using deep learning in Bioinformatics

A short tutorial on getting started with Snakemake for workflow management

Basic Sequence Taxonomy Annotator

Extract lineage CSVs from NCBI for use with sourmash lca.

A set of R scripts for the analysis of microbial profiles

Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies