Adding copyright header to all source files

src/IR_map_generator.py

@@ -1,9 +1,40 @@
+#BSD 3-Clause License
+#
+#Copyright (c) 2019, The Regents of the University of Minnesota
+#
+#All rights reserved.
+#
+#Redistribution and use in source and binary forms, with or without
+#modification, are permitted provided that the following conditions are met:
+#
+#* Redistributions of source code must retain the above copyright notice, this
+#  list of conditions and the following disclaimer.
+#
+#* Redistributions in binary form must reproduce the above copyright notice,
+#  this list of conditions and the following disclaimer in the documentation
+#  and/or other materials provided with the distribution.
+#
+#* Neither the name of the copyright holder nor the names of its
+#  contributors may be used to endorse or promote products derived from
+#  this software without specific prior written permission.
+#
+#THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+#AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+#IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+#DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+#FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+#DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+#SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+#CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+#OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+#OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
 #!/usr/bin/env python3
 # -*- coding: utf-8 -*-
 """
 Created on Thu Mar 21 21:16:37 2019
 This is the main code that runs simulated annleaing to decide the templates
-@author: chhab011
+@author:Vidya A Chhabria
 """
 
 import sys

src/T6_PSI_settings.py

@@ -1,3 +1,39 @@
+#BSD 3-Clause License
+#
+#Copyright (c) 2019, The Regents of the University of Minnesota
+#
+#All rights reserved.
+#
+#Redistribution and use in source and binary forms, with or without
+#modification, are permitted provided that the following conditions are met:
+#
+#* Redistributions of source code must retain the above copyright notice, this
+#  list of conditions and the following disclaimer.
+#
+#* Redistributions in binary form must reproduce the above copyright notice,
+#  this list of conditions and the following disclaimer in the documentation
+#  and/or other materials provided with the distribution.
+#
+#* Neither the name of the copyright holder nor the names of its
+#  contributors may be used to endorse or promote products derived from
+#  this software without specific prior written permission.
+#
+#THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+#AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+#IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+#DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+#FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+#DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+#SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+#CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+#OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+#OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+"""
+Created on Thu Mar 21 21:16:37 2019
+This file specifies the settings that are needed for OpeNPDN
+@author:Vidya A Chhabria
+"""
+
 import json
 
 

src/cnn.py

@@ -1,10 +1,41 @@
+#BSD 3-Clause License
+#
+#Copyright (c) 2019, The Regents of the University of Minnesota
+#
+#All rights reserved.
+#
+#Redistribution and use in source and binary forms, with or without
+#modification, are permitted provided that the following conditions are met:
+#
+#* Redistributions of source code must retain the above copyright notice, this
+#  list of conditions and the following disclaimer.
+#
+#* Redistributions in binary form must reproduce the above copyright notice,
+#  this list of conditions and the following disclaimer in the documentation
+#  and/or other materials provided with the distribution.
+#
+#* Neither the name of the copyright holder nor the names of its
+#  contributors may be used to endorse or promote products derived from
+#  this software without specific prior written permission.
+#
+#THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+#AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+#IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+#DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+#FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+#DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+#SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+#CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+#OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+#OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
 #!/usr/bin/env python3
 # -*- coding: utf-8 -*-
 """
 Created on Thu Mar 14 18:44:26 2019
 This script defines the complete CNN, with the layers, forward propagation and
 training. The various hyper paramters are defined.
-@author: chhab011
+@author:Vidya A Chhabria
 """
 
 from __future__ import absolute_import

src/cnn_inference.py

@@ -1,10 +1,41 @@
-#!/usr/bin/env python3
+#BSD 3-Clause License
+#
+#Copyright (c) 2019, The Regents of the University of Minnesota
+#
+#All rights reserved.
+#
+#Redistribution and use in source and binary forms, with or without
+#modification, are permitted provided that the following conditions are met:
+#
+#* Redistributions of source code must retain the above copyright notice, this
+#  list of conditions and the following disclaimer.
+#
+#* Redistributions in binary form must reproduce the above copyright notice,
+#  this list of conditions and the following disclaimer in the documentation
+#  and/or other materials provided with the distribution.
+#
+#* Neither the name of the copyright holder nor the names of its
+#  contributors may be used to endorse or promote products derived from
+#  this software without specific prior written permission.
+#
+#THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+#AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+#IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+#DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+#FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+#DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+#SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+#CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+#OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+#OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+#!/usr/bin/env python
 # -*- coding: utf-8 -*-
 """
 Created on Wed May  8 22:10:01 2019
 This script runs the inference flow using the trained optimized CNN to predict
 the class for a given testcase
-@author: chhab011
+@author:Vidya A Chhabria
 """
 
 import json

src/cnn_input.py

@@ -1,9 +1,40 @@
+#BSD 3-Clause License
+#
+#Copyright (c) 2019, The Regents of the University of Minnesota
+#
+#All rights reserved.
+#
+#Redistribution and use in source and binary forms, with or without
+#modification, are permitted provided that the following conditions are met:
+#
+#* Redistributions of source code must retain the above copyright notice, this
+#  list of conditions and the following disclaimer.
+#
+#* Redistributions in binary form must reproduce the above copyright notice,
+#  this list of conditions and the following disclaimer in the documentation
+#  and/or other materials provided with the distribution.
+#
+#* Neither the name of the copyright holder nor the names of its
+#  contributors may be used to endorse or promote products derived from
+#  this software without specific prior written permission.
+#
+#THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+#AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+#IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+#DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+#FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+#DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+#SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+#CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+#OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+#OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
 #!/usr/bin/env python3
 # -*- coding: utf-8 -*-
 """
 Created on Thu Mar 14 18:44:26 2019
 
-@author: chhab011
+@author:Vidya A Chhabria
 """
 
 from __future__ import absolute_import

src/cnn_train.py

@@ -1,9 +1,42 @@
+#BSD 3-Clause License
+#
+#Copyright (c) 2019, The Regents of the University of Minnesota
+#
+#All rights reserved.
+#
+#Redistribution and use in source and binary forms, with or without
+#modification, are permitted provided that the following conditions are met:
+#
+#* Redistributions of source code must retain the above copyright notice, this
+#  list of conditions and the following disclaimer.
+#
+#* Redistributions in binary form must reproduce the above copyright notice,
+#  this list of conditions and the following disclaimer in the documentation
+#  and/or other materials provided with the distribution.
+#
+#* Neither the name of the copyright holder nor the names of its
+#  contributors may be used to endorse or promote products derived from
+#  this software without specific prior written permission.
+#
+#THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+#AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+#IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+#DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+#FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+#DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+#SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+#CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+#OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+#OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+
+
 #!/usr/bin/env python3
 # -*- coding: utf-8 -*-
 """
 Created on Wed May  8 22:10:01 2019
 
-@author: chhab011
+@author:Vidya A Chhabria
 """
 
 import tensorflow as tf

src/construct_eqn.py

@@ -1,8 +1,39 @@
+#BSD 3-Clause License
+#
+#Copyright (c) 2019, The Regents of the University of Minnesota
+#
+#All rights reserved.
+#
+#Redistribution and use in source and binary forms, with or without
+#modification, are permitted provided that the following conditions are met:
+#
+#* Redistributions of source code must retain the above copyright notice, this
+#  list of conditions and the following disclaimer.
+#
+#* Redistributions in binary form must reproduce the above copyright notice,
+#  this list of conditions and the following disclaimer in the documentation
+#  and/or other materials provided with the distribution.
+#
+#* Neither the name of the copyright holder nor the names of its
+#  contributors may be used to endorse or promote products derived from
+#  this software without specific prior written permission.
+#
+#THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+#AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+#IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+#DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+#FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+#DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+#SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+#CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+#OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+#OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
 #!/usr/bin/env python3
 # -*- coding: utf-8 -*-
 """
 Builds the GV = J set of equations and solves it.
-@author: chhab011
+@author:Vidya A Chhabria
 Main code that integrates all submodules to generate training data. Creates the
 baseline alogrithm for the ML model to learn by generating sample output data
 for input imagess. It calls the functions to load the templates, create the

src/create_template.py

@@ -1,11 +1,43 @@
+#BSD 3-Clause License
+#
+#Copyright (c) 2019, The Regents of the University of Minnesota
+#
+#All rights reserved.
+#
+#Redistribution and use in source and binary forms, with or without
+#modification, are permitted provided that the following conditions are met:
+#
+#* Redistributions of source code must retain the above copyright notice, this
+#  list of conditions and the following disclaimer.
+#
+#* Redistributions in binary form must reproduce the above copyright notice,
+#  this list of conditions and the following disclaimer in the documentation
+#  and/or other materials provided with the distribution.
+#
+#* Neither the name of the copyright holder nor the names of its
+#  contributors may be used to endorse or promote products derived from
+#  this software without specific prior written permission.
+#
+#THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+#AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+#IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+#DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+#FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+#DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+#SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+#CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+#OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+#OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+
 #!/usr/bin/env python3
 # -*- coding: utf-8 -*-
 """
 Created on Sun Dec 16 01:36:00 2018
 This script is the main function which calls the functions to create G matrices
 for all the possible templates and stores them. This ensures you do not have to
 create it on the fly for every iteration
-@author: chhab011
+@author:Vidya A Chhabria
 """
 
 import time

src/current_map_generator.py

@@ -1,4 +1,43 @@
+#BSD 3-Clause License
+#
+#Copyright (c) 2019, The Regents of the University of Minnesota
+#
+#All rights reserved.
+#
+#Redistribution and use in source and binary forms, with or without
+#modification, are permitted provided that the following conditions are met:
+#
+#* Redistributions of source code must retain the above copyright notice, this
+#  list of conditions and the following disclaimer.
+#
+#* Redistributions in binary form must reproduce the above copyright notice,
+#  this list of conditions and the following disclaimer in the documentation
+#  and/or other materials provided with the distribution.
+#
+#* Neither the name of the copyright holder nor the names of its
+#  contributors may be used to endorse or promote products derived from
+#  this software without specific prior written permission.
+#
+#THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+#AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+#IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+#DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+#FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+#DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+#SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+#CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+#OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+#OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+
 #!/usr/bin/python
+
+"""
+Created on Wed May  8 22:10:01 2019
+
+@author:Vidya A Chhabria
+"""
+
 import re
 import sys
 import os