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Issues list

compile_pfb.pl issue
#119 by taeiseul was closed Mar 28, 2024
Create hg38 GC model
#116 by BioinfoRDX was closed Feb 26, 2024
2
Confidence score updating when merging calls in clean_cnv.pl
#114 by JinhanZhu1 was closed Dec 19, 2023
2
.hmm file
#111 by DrFakhar was closed Jul 20, 2023
7
GenomeStudio CNV Table Export
#101 by jng2 was closed Feb 9, 2023
2
Singularity use
#98 by lgmgeo was closed Jan 6, 2023
4
Missing files from affymetrix website
#96 by e-sollier was closed Oct 26, 2022
4
Question: Can PennCNV differentiate homozygous and heterozygous CNV calls?
#95 by vikrantsingh1 was closed Oct 21, 2022
2
LOH / state4,cn=2 is never called
#92 by Nicolai-vKuegelgen was closed Dec 28, 2022
12
Docker to Singularity root user access
#91 by joshuamschmidt was closed Oct 26, 2022
1
Compile pfb Bovine data
#86 by rodrigopsav was closed Jun 8, 2022
2
Running PennCNV in parallel
#82 by sophie-03 was closed Feb 14, 2023
1
Creating individual log and BAF input files
#81 by sophie-03 was closed May 13, 2022
1
clean_cnv.pl output - Empty file
#79 by mrinalmishra was closed Feb 22, 2022
1
GCmodel file for Bostaurus
#78 by oshintogla was closed Feb 24, 2022
Visualization_error
#75 by nitzzzzzzz was closed Jan 10, 2022
qcnumcnv
#70 by psychrb was closed Mar 18, 2021
1
Error: no snpdist defined
#69 by elinejk was closed Jun 28, 2021
4
Error: expect to read B allele after reading A allele , but instead read A
#61 by adamluo12 was closed Nov 30, 2020
PennCNV error
#54 by hui-1 was closed Apr 21, 2020
4
GCmodel not in /lib
#51 by YannLeGuen was closed Jan 29, 2020
5
PennCNV-Affy for Genome-wide 6.0
#49 by Taylor95 was closed Dec 11, 2019
3
Unable to locate HMM File for Axiom UKB Array
#46 by npatel22526 was closed Sep 27, 2019
2
Visualization error
#44 by andrisvAria was closed Aug 8, 2019
4
custom pfb - duplicate values
#43 by andrisvAria was closed Jun 5, 2019
3
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