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WangLab@UCSD

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  1. RESP RESP Public

    The code used to generate the results from Parkinson / Hard et al. 2022

    Python 17 7

  2. AntPack AntPack Public

    Forked from jlparkI/AntPack

    Tools for annotation, processing and ML for antibody sequences

    Python 7

  3. TUnA TUnA Public

    TUnA: Transformer-based Uncertainty Aware model for PPI Prediction

    Python 4

  4. Benchmarking-tpLMs Benchmarking-tpLMs Public

    Python 4 1

  5. Taiji-reprogram Taiji-reprogram Public

    R 2

  6. SomaticMutation SomaticMutation Public

    Python 2

Repositories

Showing 10 of 20 repositories
  • AntPack Public Forked from jlparkI/AntPack

    Tools for annotation, processing and ML for antibody sequences

    Wang-lab-UCSD/AntPack’s past year of commit activity
    Python 7 GPL-3.0 2 0 0 Updated Jan 3, 2025
  • Taiji_ALTRA Public

    Code for Taiji ALTRA project

    Wang-lab-UCSD/Taiji_ALTRA’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Dec 30, 2024
  • RESP2 Public

    Code needed to reproduce experiments from Parkinson / Hard et al. 2024

    Wang-lab-UCSD/RESP2’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Nov 5, 2024
  • RESP Public

    The code used to generate the results from Parkinson / Hard et al. 2022

    Wang-lab-UCSD/RESP’s past year of commit activity
    Python 17 7 0 0 Updated Nov 5, 2024
  • antibody_engineering_scoring Public

    Compares simple models (xgboost, xgpr) with fine-tuned LLMs / embeddings on some antibody property prediction tasks

    Wang-lab-UCSD/antibody_engineering_scoring’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Oct 25, 2024
  • Taiji2 Public

    R toolkit for enhanced downstream analysis of Taiji

    Wang-lab-UCSD/Taiji2’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 1 0 0 Updated Sep 23, 2024
  • Benchmarking-tpLMs Public
    Wang-lab-UCSD/Benchmarking-tpLMs’s past year of commit activity
    Python 4 1 0 0 Updated Aug 23, 2024
  • Taiji-reprogram Public
    Wang-lab-UCSD/Taiji-reprogram’s past year of commit activity
    R 2 MIT 0 0 0 Updated Aug 10, 2024
  • TUnA Public

    TUnA: Transformer-based Uncertainty Aware model for PPI Prediction

    Wang-lab-UCSD/TUnA’s past year of commit activity
    Python 4 MIT 0 0 0 Updated Jun 4, 2024
  • Motif_Finding_Contextual_Regression Public
    Wang-lab-UCSD/Motif_Finding_Contextual_Regression’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Feb 12, 2024
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