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@Wendellab

Wendel Lab

Repository for analyses originating from or in collaboration with our lab

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  1. CisTransRegulation CisTransRegulation Public

    Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum

    R 16 7

  2. Co-expressionNetwork Co-expressionNetwork Public

    Scripts and documentation of co-expression network analysis

    HTML 6 10

  3. homoeologGeneExpression-Coexpression homoeologGeneExpression-Coexpression Public

    Challenges and pitfall in the use of partitioned gene counts for homoeologous gene expression and co-expression network analyses

    R 6 3

  4. SeedDevelopment SeedDevelopment Public

    Documentation and scripts for analyses of cottonseed development

    R 3 1

  5. FiberNetwork FiberNetwork Public

    Forked from XLEvolutionist/FiberNetwork

    WGCNA analysis using Fiber RNA seq data

    R 2 2

  6. diploidDphylogeny diploidDphylogeny Public

    Scripts and commands associated with generating the phylogeny of the diploid D genome in cotton

    R 2 1

Repositories

Showing 10 of 40 repositories
  • MoundKeyCottons Public

    Analyses pertaining to the Mound Key Cottons (2024)

    Wendellab/MoundKeyCottons’s past year of commit activity
    R 0 GPL-3.0 1 0 0 Updated Sep 9, 2024
  • cottonMNase-seq Public

    Data analysis

    Wendellab/cottonMNase-seq’s past year of commit activity
    R 0 0 0 0 Updated Jun 7, 2024
  • TM1fiber Public

    Code pertaining to the analysis of the Gossypium hirsutum cv TM1 transcriptome during fiber development

    Wendellab/TM1fiber’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Apr 22, 2024
  • CisTransRegulation Public

    Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum

    Wendellab/CisTransRegulation’s past year of commit activity
    R 16 GPL-2.0 7 0 0 Updated Dec 19, 2023
  • CytonuclearExpression Public

    Cytonuclear expression analyses for 4 polyploid genera: Arabidopsis, Arachis, Chenopodium, and Gossypium

    Wendellab/CytonuclearExpression’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Jul 27, 2022
  • SaltStressTranscriptome Public

    Evolutionary changes in gene expression during divergence of diploid and polyploid cotton

    Wendellab/SaltStressTranscriptome’s past year of commit activity
    R 1 0 0 0 Updated Feb 16, 2022
  • A1A2resequencing Public

    Resequencing of Gossypium herbaceum and G. arboreum

    Wendellab/A1A2resequencing’s past year of commit activity
    HTML 0 GPL-3.0 0 0 0 Updated Jan 7, 2022
  • anomalum Public

    Scripts for the analysis of the G. anomalum (B1) genome

    Wendellab/anomalum’s past year of commit activity
    Perl 0 GPL-3.0 0 0 0 Updated Aug 3, 2021
  • BYUReseq Public

    Resequencing of many accessions with BYU

    Wendellab/BYUReseq’s past year of commit activity
    R 2 GPL-3.0 0 1 0 Updated Apr 28, 2021
  • stocksii Public

    scripts for the genome sequence of stocksii

    Wendellab/stocksii’s past year of commit activity
    HTML 0 GPL-3.0 0 0 0 Updated Feb 8, 2021
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