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hg38.chromAlias.txt
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hg38.chromAlias.txt
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# ucsc assembly ensembl genbank refseq
chr1 1 1 CM000663.2 NC_000001.11
chr10 10 10 CM000672.2 NC_000010.11
chr10_GL383545v1_alt HSCHR10_1_CTG1 GL383545.1 NW_003315934.1
chr10_GL383546v1_alt HSCHR10_1_CTG2 GL383546.1 NW_003315935.1
chr10_KI270824v1_alt HSCHR10_1_CTG3 KI270824.1 NT_187579.1
chr10_KI270825v1_alt HSCHR10_1_CTG4 KI270825.1 NT_187580.1
chr10_KN196480v1_fix HG2191_PATCH KN196480.1 NW_009646202.1
chr10_KN538365v1_fix HG2241_PATCH KN538365.1 NW_011332692.1
chr10_KN538366v1_fix HG2242_HG2243_PATCH KN538366.1 NW_011332693.1
chr10_KN538367v1_fix HG2244_HG2245_PATCH KN538367.1 NW_011332694.1
chr10_KQ090020v1_alt HSCHR10_1_CTG6 KQ090020.1 NW_013171806.1
chr10_KQ090021v1_fix HG2334_PATCH KQ090021.1 NW_013171807.1
chr10_ML143354v1_fix HG545_PATCH ML143354.1 NW_021160000.1
chr10_ML143355v1_fix HG1277_PATCH ML143355.1 NW_021160001.1
chr11 11 11 CM000673.2 NC_000011.10
chr11_GL383547v1_alt HSCHR11_1_CTG1_1 GL383547.1 NW_003315936.1
chr11_JH159136v1_alt HG142_HG150_NOVEL_TEST JH159136.1 NW_003871073.1
chr11_JH159137v1_alt HG151_NOVEL_TEST JH159137.1 NW_003871074.1
chr11_KI270721v1_random HSCHR11_CTG1_UNLOCALIZED KI270721.1 KI270721.1 NT_187376.1
chr11_KI270826v1_alt HSCHR11_1_CTG2 KI270826.1 NT_187581.1
chr11_KI270827v1_alt HSCHR11_1_CTG3 KI270827.1 NT_187582.1
chr11_KI270829v1_alt HSCHR11_1_CTG5 KI270829.1 NT_187583.1
chr11_KI270830v1_alt HSCHR11_1_CTG6 KI270830.1 NT_187584.1
chr11_KI270831v1_alt HSCHR11_1_CTG7 KI270831.1 NT_187585.1
chr11_KI270832v1_alt HSCHR11_1_CTG8 KI270832.1 NT_187586.1
chr11_KI270902v1_alt HSCHR11_2_CTG1 KI270902.1 NT_187656.1
chr11_KI270903v1_alt HSCHR11_2_CTG1_1 KI270903.1 NT_187657.1
chr11_KI270927v1_alt HSCHR11_3_CTG1 KI270927.1 NT_187681.1
chr11_KN196481v1_fix HG2217_PATCH KN196481.1 NW_009646203.1
chr11_KN538368v1_alt HSCHR11_1_CTG1_2 KN538368.1 NW_011332695.1
chr11_KQ090022v1_fix HG2116_PATCH KQ090022.1 NW_013171808.1
chr11_KQ759759v1_fix HG107_PATCH KQ759759.1 NW_015148966.1
chr11_KV766195v1_fix HG1708_PATCH KV766195.1 NW_017363816.1
chr11_KZ559108v1_fix HG2060_PATCH KZ559108.1 NW_019805495.1
chr11_KZ559109v1_fix HG2114_PATCH KZ559109.1 NW_019805496.1
chr11_KZ559110v1_alt HSCHR11_2_CTG8 KZ559110.1 NW_019805497.1
chr11_KZ559111v1_alt HSCHR11_1_CTG3_1 KZ559111.1 NW_019805498.1
chr11_ML143356v1_fix HG1521_PATCH ML143356.1 NW_021160002.1
chr11_ML143357v1_fix HG1445_PATCH ML143357.1 NW_021160003.1
chr11_ML143358v1_fix HG28_PATCH ML143358.1 NW_021160004.1
chr11_ML143359v1_fix HG2115_PATCH ML143359.1 NW_021160005.1
chr11_ML143360v1_fix HG2111_PATCH ML143360.1 NW_021160006.1
chr12 12 12 CM000674.2 NC_000012.12
chr12_GL383549v1_alt HSCHR12_1_CTG2 GL383549.1 NW_003315938.1
chr12_GL383550v2_alt HSCHR12_1_CTG2_1 GL383550.2 NW_003315939.2
chr12_GL383551v1_alt HSCHR12_4_CTG2_1 GL383551.1 NW_003315940.1
chr12_GL383552v1_alt HSCHR12_2_CTG2_1 GL383552.1 NW_003315941.1
chr12_GL383553v2_alt HSCHR12_3_CTG2_1 GL383553.2 NW_003315942.2
chr12_GL877875v1_alt HSCHR12_1_CTG1 GL877875.1 NW_003571049.1
chr12_GL877876v1_alt HSCHR12_2_CTG2 GL877876.1 NW_003571050.1
chr12_KI270833v1_alt HSCHR12_5_CTG2_1 KI270833.1 NT_187589.1
chr12_KI270834v1_alt HSCHR12_6_CTG2_1 KI270834.1 NT_187590.1
chr12_KI270835v1_alt HSCHR12_4_CTG2 KI270835.1 NT_187587.1
chr12_KI270836v1_alt HSCHR12_7_CTG2_1 KI270836.1 NT_187591.1
chr12_KI270837v1_alt HSCHR12_5_CTG2 KI270837.1 NT_187588.1
chr12_KI270904v1_alt HSCHR12_3_CTG2 KI270904.1 NT_187658.1
chr12_KN196482v1_fix HG23_PATCH KN196482.1 NW_009646204.1
chr12_KN538369v1_fix HG1362_PATCH KN538369.1 NW_011332696.1
chr12_KN538370v1_fix HG2247_PATCH KN538370.1 NW_011332697.1
chr12_KQ090023v1_alt HSCHR12_2_CTG1 KQ090023.1 NW_013171809.1
chr12_KQ759760v1_fix HG2063_PATCH KQ759760.1 NW_015148967.1
chr12_KZ208916v1_fix HG1815_PATCH KZ208916.1 NW_018654718.1
chr12_KZ208917v1_fix HG2047_PATCH KZ208917.1 NW_018654719.1
chr12_KZ208918v1_alt HSCHR12_8_CTG2_1 KZ208918.1 NW_018654720.1
chr12_KZ559112v1_alt HSCHR12_9_CTG2_1 KZ559112.1 NW_019805499.1
chr12_ML143361v1_fix HG2246_HG2248_HG2276_PATCH ML143361.1 NW_021160007.1
chr12_ML143362v1_fix HG1398_PATCH ML143362.1 NW_021160008.1
chr13 13 13 CM000675.2 NC_000013.11
chr13_KI270838v1_alt HSCHR13_1_CTG1 KI270838.1 NT_187592.1
chr13_KI270839v1_alt HSCHR13_1_CTG2 KI270839.1 NT_187593.1
chr13_KI270840v1_alt HSCHR13_1_CTG3 KI270840.1 NT_187594.1
chr13_KI270841v1_alt HSCHR13_1_CTG4 KI270841.1 NT_187595.1
chr13_KI270842v1_alt HSCHR13_1_CTG5 KI270842.1 NT_187596.1
chr13_KI270843v1_alt HSCHR13_1_CTG6 KI270843.1 NT_187597.1
chr13_KN196483v1_fix HG2216_PATCH KN196483.1 NW_009646205.1
chr13_KN538371v1_fix HG2288_HG2289_PATCH KN538371.1 NW_011332698.1
chr13_KN538372v1_fix HG2291_PATCH KN538372.1 NW_011332699.1
chr13_KN538373v1_fix HG2249_PATCH KN538373.1 NW_011332700.1
chr13_KQ090024v1_alt HSCHR13_1_CTG7 KQ090024.1 NW_013171810.1
chr13_KQ090025v1_alt HSCHR13_1_CTG8 KQ090025.1 NW_013171811.1
chr13_ML143363v1_fix HG1817_1_PATCH ML143363.1 NW_021160009.1
chr13_ML143364v1_fix HG1523_PATCH ML143364.1 NW_021160010.1
chr13_ML143365v1_fix HG1524_PATCH ML143365.1 NW_021160011.1
chr13_ML143366v1_fix HG2509_PATCH ML143366.1 NW_021160012.1
chr14 14 14 CM000676.2 NC_000014.9
chr14_GL000009v2_random HSCHR14_CTG1_UNLOCALIZED GL000009.2 GL000009.2 NT_113796.3
chr14_GL000194v1_random HSCHR14_CTG4_UNLOCALIZED GL000194.1 GL000194.1 NT_113888.1
chr14_GL000225v1_random HSCHR14_CTG2_UNLOCALIZED GL000225.1 GL000225.1 NT_167219.1
chr14_KI270722v1_random HSCHR14_CTG3_UNLOCALIZED KI270722.1 KI270722.1 NT_187377.1
chr14_KI270723v1_random HSCHR14_CTG5_UNLOCALIZED KI270723.1 KI270723.1 NT_187378.1
chr14_KI270724v1_random HSCHR14_CTG6_UNLOCALIZED KI270724.1 KI270724.1 NT_187379.1
chr14_KI270725v1_random HSCHR14_CTG7_UNLOCALIZED KI270725.1 KI270725.1 NT_187380.1
chr14_KI270726v1_random HSCHR14_CTG8_UNLOCALIZED KI270726.1 KI270726.1 NT_187381.1
chr14_KI270844v1_alt HSCHR14_1_CTG1 KI270844.1 NT_187598.1
chr14_KI270845v1_alt HSCHR14_2_CTG1 KI270845.1 NT_187599.1
chr14_KI270846v1_alt HSCHR14_3_CTG1 KI270846.1 NT_187600.1
chr14_KI270847v1_alt HSCHR14_7_CTG1 KI270847.1 NT_187601.1
chr14_KZ208919v1_alt HSCHR14_8_CTG1 KZ208919.1 NW_018654721.1
chr14_KZ208920v1_fix HG1_PATCH KZ208920.1 NW_018654722.1
chr14_ML143367v1_fix HG2510_PATCH ML143367.1 NW_021160013.1
chr14_ML143368v1_alt HSCHR14_9_CTG1 ML143368.1 NW_021160014.1
chr15 15 15 CM000677.2 NC_000015.10
chr15_GL383554v1_alt HSCHR15_1_CTG8 GL383554.1 NW_003315943.1
chr15_GL383555v2_alt HSCHR15_2_CTG8 GL383555.2 NW_003315944.2
chr15_KI270727v1_random HSCHR15_RANDOM_CTG1 KI270727.1 KI270727.1 NT_187382.1
chr15_KI270848v1_alt HSCHR15_1_CTG3 KI270848.1 NT_187603.1
chr15_KI270849v1_alt HSCHR15_3_CTG8 KI270849.1 NT_187605.1
chr15_KI270850v1_alt HSCHR15_5_CTG8 KI270850.1 NT_187606.1
chr15_KI270851v1_alt HSCHR15_3_CTG3 KI270851.1 NT_187604.1
chr15_KI270852v1_alt HSCHR15_1_CTG1 KI270852.1 NT_187602.1
chr15_KI270905v1_alt HSCHR15_4_CTG8 KI270905.1 NT_187660.1
chr15_KI270906v1_alt HSCHR15_2_CTG3 KI270906.1 NT_187659.1
chr15_KN538374v1_fix HG2139_PATCH KN538374.1 NW_011332701.1
chr15_KQ031389v1_alt HSCHR15_6_CTG8 KQ031389.1 NW_012132920.1
chr15_ML143369v1_fix HG2499_PATCH ML143369.1 NW_021160015.1
chr15_ML143370v1_fix HG2198_PATCH ML143370.1 NW_021160016.1
chr15_ML143371v1_fix HG2365_PATCH ML143371.1 NW_021160017.1
chr15_ML143372v1_fix HG2511_PATCH ML143372.1 NW_021160018.1
chr16 16 16 CM000678.2 NC_000016.10
chr16_GL383556v1_alt HSCHR16_1_CTG3_1 GL383556.1 NW_003315945.1
chr16_GL383557v1_alt HSCHR16_2_CTG3_1 GL383557.1 NW_003315946.1
chr16_KI270728v1_random HSCHR16_RANDOM_CTG1 KI270728.1 KI270728.1 NT_187383.1
chr16_KI270853v1_alt HSCHR16_1_CTG1 KI270853.1 NT_187607.1
chr16_KI270854v1_alt HSCHR16_CTG2 KI270854.1 NT_187610.1
chr16_KI270855v1_alt HSCHR16_3_CTG1 KI270855.1 NT_187608.1
chr16_KI270856v1_alt HSCHR16_4_CTG1 KI270856.1 NT_187609.1
chr16_KQ031390v1_alt HSCHR16_3_CTG3_1 KQ031390.1 NW_012132921.1
chr16_KQ090026v1_alt HSCHR16_5_CTG1 KQ090026.1 NW_013171812.1
chr16_KQ090027v1_alt HSCHR16_4_CTG3_1 KQ090027.1 NW_013171813.1
chr16_KV880768v1_fix HG926_PATCH KV880768.1 NW_017852933.1
chr16_KZ208921v1_alt HSCHR16_5_CTG3_1 KZ208921.1 NW_018654723.1
chr16_KZ559113v1_fix HG2263_PATCH KZ559113.1 NW_019805500.1
chr16_ML143373v1_fix HG2471_PATCH ML143373.1 NW_021160019.1
chr17 17 17 CM000679.2 NC_000017.11
chr17_GL000205v2_random HSCHR17_RANDOM_CTG3 GL000205.2 GL000205.2 NT_113930.2
chr17_GL000258v2_alt HSCHR17_1_CTG5 GL000258.2 NT_167251.2
chr17_GL383563v3_alt HSCHR17_1_CTG1 GL383563.3 NW_003315952.3
chr17_GL383564v2_alt HSCHR17_1_CTG4 GL383564.2 NW_003315953.2
chr17_GL383565v1_alt HSCHR17_2_CTG4 GL383565.1 NW_003315954.1
chr17_GL383566v1_alt HSCHR17_3_CTG4 GL383566.1 NW_003315955.1
chr17_JH159146v1_alt HSCHR17_4_CTG4 JH159146.1 NW_003871091.1
chr17_JH159147v1_alt HSCHR17_5_CTG4 JH159147.1 NW_003871092.1
chr17_JH159148v1_alt HSCHR17_6_CTG4 JH159148.1 NW_003871093.1
chr17_KI270729v1_random HSCHR17_RANDOM_CTG4 KI270729.1 KI270729.1 NT_187384.1
chr17_KI270730v1_random HSCHR17_RANDOM_CTG5 KI270730.1 KI270730.1 NT_187385.1
chr17_KI270857v1_alt HSCHR17_7_CTG4 KI270857.1 NT_187614.1
chr17_KI270858v1_alt HSCHR17_8_CTG4 KI270858.1 NT_187615.1
chr17_KI270859v1_alt HSCHR17_9_CTG4 KI270859.1 NT_187616.1
chr17_KI270860v1_alt HSCHR17_1_CTG9 KI270860.1 NT_187612.1
chr17_KI270861v1_alt HSCHR17_1_CTG2 KI270861.1 NT_187611.1
chr17_KI270862v1_alt HSCHR17_2_CTG2 KI270862.1 NT_187613.1
chr17_KI270907v1_alt HSCHR17_2_CTG1 KI270907.1 NT_187662.1
chr17_KI270908v1_alt HSCHR17_2_CTG5 KI270908.1 NT_187663.1
chr17_KI270909v1_alt HSCHR17_10_CTG4 KI270909.1 NT_187661.1
chr17_KI270910v1_alt HSCHR17_3_CTG2 KI270910.1 NT_187664.1
chr17_KV575245v1_fix HG2046_PATCH KV575245.1 NW_016107299.1
chr17_KV766196v1_fix HG2285_HG106_HG2252_PATCH KV766196.1 NW_017363817.1
chr17_KV766197v1_alt HSCHR17_11_CTG4 KV766197.1 NW_017363818.1
chr17_KV766198v1_alt HSCHR17_3_CTG1 KV766198.1 NW_017363819.1
chr17_KZ559114v1_alt HSCHR17_12_CTG4 KZ559114.1 NW_019805501.1
chr17_ML143374v1_fix HG2087_PATCH ML143374.1 NW_021160020.1
chr17_ML143375v1_fix HG1320_PATCH ML143375.1 NW_021160021.1
chr18 18 18 CM000680.2 NC_000018.10
chr18_GL383567v1_alt HSCHR18_1_CTG1_1 GL383567.1 NW_003315956.1
chr18_GL383568v1_alt HSCHR18_1_CTG2 GL383568.1 NW_003315957.1
chr18_GL383569v1_alt HSCHR18_1_CTG2_1 GL383569.1 NW_003315958.1
chr18_GL383570v1_alt HSCHR18_2_CTG1_1 GL383570.1 NW_003315959.1
chr18_GL383571v1_alt HSCHR18_2_CTG2 GL383571.1 NW_003315960.1
chr18_GL383572v1_alt HSCHR18_2_CTG2_1 GL383572.1 NW_003315961.1
chr18_KI270863v1_alt HSCHR18_3_CTG2_1 KI270863.1 NT_187617.1
chr18_KI270864v1_alt HSCHR18_4_CTG1_1 KI270864.1 NT_187618.1
chr18_KI270911v1_alt HSCHR18_ALT2_CTG2_1 KI270911.1 NT_187666.1
chr18_KI270912v1_alt HSCHR18_ALT21_CTG2_1 KI270912.1 NT_187665.1
chr18_KQ090028v1_fix HG2213_PATCH KQ090028.1 NW_013171814.1
chr18_KQ458385v1_alt HSCHR18_5_CTG1_1 KQ458385.1 NW_014040928.1
chr18_KZ208922v1_fix HG2442_PATCH KZ208922.1 NW_018654724.1
chr18_KZ559115v1_fix HG2412_PATCH KZ559115.1 NW_019805502.1
chr18_KZ559116v1_alt HSCHR18_1_CTG1 KZ559116.1 NW_019805503.1
chr19 19 19 CM000681.2 NC_000019.10
chr19_GL000209v2_alt HSCHR19KIR_RP5_B_HAP_CTG3_1 GL000209.2 NT_113949.2
chr19_GL383573v1_alt HSCHR19_1_CTG2 GL383573.1 NW_003315962.1
chr19_GL383574v1_alt HSCHR19_1_CTG3_1 GL383574.1 NW_003315963.1
chr19_GL383575v2_alt HSCHR19_2_CTG2 GL383575.2 NW_003315964.2
chr19_GL383576v1_alt HSCHR19_3_CTG2 GL383576.1 NW_003315965.1
chr19_GL949746v1_alt HSCHR19LRC_COX1_CTG3_1 GL949746.1 NW_003571054.1
chr19_GL949747v2_alt HSCHR19LRC_COX2_CTG3_1 GL949747.2 NW_003571055.2
chr19_GL949748v2_alt HSCHR19LRC_LRC_I_CTG3_1 GL949748.2 NW_003571056.2
chr19_GL949749v2_alt HSCHR19LRC_LRC_J_CTG3_1 GL949749.2 NW_003571057.2
chr19_GL949750v2_alt HSCHR19LRC_LRC_S_CTG3_1 GL949750.2 NW_003571058.2
chr19_GL949751v2_alt HSCHR19LRC_LRC_T_CTG3_1 GL949751.2 NW_003571059.2
chr19_GL949752v1_alt HSCHR19LRC_PGF1_CTG3_1 GL949752.1 NW_003571060.1
chr19_GL949753v2_alt HSCHR19LRC_PGF2_CTG3_1 GL949753.2 NW_003571061.2
chr19_KI270865v1_alt HSCHR19_4_CTG2 KI270865.1 NT_187621.1
chr19_KI270866v1_alt HSCHR19_2_CTG3_1 KI270866.1 NT_187619.1
chr19_KI270867v1_alt HSCHR19_3_CTG3_1 KI270867.1 NT_187620.1
chr19_KI270868v1_alt HSCHR19_5_CTG2 KI270868.1 NT_187622.1
chr19_KI270882v1_alt HSCHR19KIR_FH15_B_HAP_CTG3_1 KI270882.1 NT_187636.1
chr19_KI270883v1_alt HSCHR19KIR_G085_A_HAP_CTG3_1 KI270883.1 NT_187637.1
chr19_KI270884v1_alt HSCHR19KIR_G085_BA1_HAP_CTG3_1 KI270884.1 NT_187638.1
chr19_KI270885v1_alt HSCHR19KIR_G248_A_HAP_CTG3_1 KI270885.1 NT_187639.1
chr19_KI270886v1_alt HSCHR19KIR_G248_BA2_HAP_CTG3_1 KI270886.1 NT_187640.1
chr19_KI270887v1_alt HSCHR19KIR_GRC212_AB_HAP_CTG3_1 KI270887.1 NT_187641.1
chr19_KI270888v1_alt HSCHR19KIR_GRC212_BA1_HAP_CTG3_1 KI270888.1 NT_187642.1
chr19_KI270889v1_alt HSCHR19KIR_LUCE_A_HAP_CTG3_1 KI270889.1 NT_187643.1
chr19_KI270890v1_alt HSCHR19KIR_LUCE_BDEL_HAP_CTG3_1 KI270890.1 NT_187644.1
chr19_KI270891v1_alt HSCHR19KIR_RSH_A_HAP_CTG3_1 KI270891.1 NT_187645.1
chr19_KI270914v1_alt HSCHR19KIR_RSH_BA2_HAP_CTG3_1 KI270914.1 NT_187668.1
chr19_KI270915v1_alt HSCHR19KIR_T7526_A_HAP_CTG3_1 KI270915.1 NT_187669.1
chr19_KI270916v1_alt HSCHR19KIR_T7526_BDEL_HAP_CTG3_1 KI270916.1 NT_187670.1
chr19_KI270917v1_alt HSCHR19KIR_ABC08_A1_HAP_CTG3_1 KI270917.1 NT_187671.1
chr19_KI270918v1_alt HSCHR19KIR_ABC08_AB_HAP_C_P_CTG3_1 KI270918.1 NT_187672.1
chr19_KI270919v1_alt HSCHR19KIR_ABC08_AB_HAP_T_P_CTG3_1 KI270919.1 NT_187673.1
chr19_KI270920v1_alt HSCHR19KIR_FH05_A_HAP_CTG3_1 KI270920.1 NT_187674.1
chr19_KI270921v1_alt HSCHR19KIR_FH05_B_HAP_CTG3_1 KI270921.1 NT_187675.1
chr19_KI270922v1_alt HSCHR19KIR_FH06_A_HAP_CTG3_1 KI270922.1 NT_187676.1
chr19_KI270923v1_alt HSCHR19KIR_FH06_BA1_HAP_CTG3_1 KI270923.1 NT_187677.1
chr19_KI270929v1_alt HSCHR19KIR_FH08_A_HAP_CTG3_1 KI270929.1 NT_187683.1
chr19_KI270930v1_alt HSCHR19KIR_FH08_BAX_HAP_CTG3_1 KI270930.1 NT_187684.1
chr19_KI270931v1_alt HSCHR19KIR_FH13_A_HAP_CTG3_1 KI270931.1 NT_187685.1
chr19_KI270932v1_alt HSCHR19KIR_FH13_BA2_HAP_CTG3_1 KI270932.1 NT_187686.1
chr19_KI270933v1_alt HSCHR19KIR_FH15_A_HAP_CTG3_1 KI270933.1 NT_187687.1
chr19_KI270938v1_alt HSCHR19_4_CTG3_1 KI270938.1 NT_187693.1
chr19_KN196484v1_fix HG2021_PATCH KN196484.1 NW_009646206.1
chr19_KQ458386v1_fix HG26_PATCH KQ458386.1 NW_014040929.1
chr19_KV575246v1_alt HSCHR19KIR_0019-4656-A_CTG3_1 KV575246.1 NW_016107300.1
chr19_KV575247v1_alt HSCHR19KIR_CA01-TA01_1_CTG3_1 KV575247.1 NW_016107301.1
chr19_KV575248v1_alt HSCHR19KIR_CA01-TA01_2_CTG3_1 KV575248.1 NW_016107302.1
chr19_KV575249v1_alt HSCHR19KIR_CA01-TB04_CTG3_1 KV575249.1 NW_016107303.1
chr19_KV575250v1_alt HSCHR19KIR_CA01-TB01_CTG3_1 KV575250.1 NW_016107304.1
chr19_KV575251v1_alt HSCHR19KIR_HG2394_CTG3_1 KV575251.1 NW_016107305.1
chr19_KV575252v1_alt HSCHR19KIR_502960008-2_CTG3_1 KV575252.1 NW_016107306.1
chr19_KV575253v1_alt HSCHR19KIR_502960008-1_CTG3_1 KV575253.1 NW_016107307.1
chr19_KV575254v1_alt HSCHR19KIR_0010-5217-AB_CTG3_1 KV575254.1 NW_016107308.1
chr19_KV575255v1_alt HSCHR19KIR_7191059-1_CTG3_1 KV575255.1 NW_016107309.1
chr19_KV575256v1_alt HSCHR19KIR_0019-4656-B_CTG3_1 KV575256.1 NW_016107310.1
chr19_KV575257v1_alt HSCHR19KIR_CA04_CTG3_1 KV575257.1 NW_016107311.1
chr19_KV575258v1_alt HSCHR19KIR_HG2393_CTG3_1 KV575258.1 NW_016107312.1
chr19_KV575259v1_alt HSCHR19KIR_7191059-2_CTG3_1 KV575259.1 NW_016107313.1
chr19_KV575260v1_alt HSCHR19KIR_HG2396_CTG3_1 KV575260.1 NW_016107314.1
chr19_ML143376v1_fix HG109_PATCH ML143376.1 NW_021160022.1
chr1_GL383518v1_alt HSCHR1_1_CTG31 GL383518.1 NW_003315905.1
chr1_GL383519v1_alt HSCHR1_2_CTG31 GL383519.1 NW_003315906.1
chr1_GL383520v2_alt HSCHR1_3_CTG31 GL383520.2 NW_003315907.2
chr1_KI270706v1_random HSCHR1_CTG1_UNLOCALIZED KI270706.1 KI270706.1 NT_187361.1
chr1_KI270707v1_random HSCHR1_CTG2_UNLOCALIZED KI270707.1 KI270707.1 NT_187362.1
chr1_KI270708v1_random HSCHR1_CTG3_UNLOCALIZED KI270708.1 KI270708.1 NT_187363.1
chr1_KI270709v1_random HSCHR1_CTG4_UNLOCALIZED KI270709.1 KI270709.1 NT_187364.1
chr1_KI270710v1_random HSCHR1_CTG5_UNLOCALIZED KI270710.1 KI270710.1 NT_187365.1
chr1_KI270711v1_random HSCHR1_CTG6_UNLOCALIZED KI270711.1 KI270711.1 NT_187366.1
chr1_KI270712v1_random HSCHR1_CTG7_UNLOCALIZED KI270712.1 KI270712.1 NT_187367.1
chr1_KI270713v1_random HSCHR1_CTG8_UNLOCALIZED KI270713.1 KI270713.1 NT_187368.1
chr1_KI270714v1_random HSCHR1_CTG9_UNLOCALIZED KI270714.1 KI270714.1 NT_187369.1
chr1_KI270759v1_alt HSCHR1_1_CTG32_1 KI270759.1 NT_187516.1
chr1_KI270760v1_alt HSCHR1_1_CTG11 KI270760.1 NT_187514.1
chr1_KI270761v1_alt HSCHR1_2_CTG32_1 KI270761.1 NT_187518.1
chr1_KI270762v1_alt HSCHR1_1_CTG3 KI270762.1 NT_187515.1
chr1_KI270763v1_alt HSCHR1_3_CTG32_1 KI270763.1 NT_187519.1
chr1_KI270764v1_alt HSCHR1_4_CTG32_1 KI270764.1 NT_187521.1
chr1_KI270765v1_alt HSCHR1_4_CTG31 KI270765.1 NT_187520.1
chr1_KI270766v1_alt HSCHR1_2_CTG3 KI270766.1 NT_187517.1
chr1_KI270892v1_alt HSCHR1_ALT2_1_CTG32_1 KI270892.1 NT_187646.1
chr1_KN196472v1_fix HG986_PATCH KN196472.1 NW_009646194.1
chr1_KN196473v1_fix HG2058_PATCH KN196473.1 NW_009646195.1
chr1_KN196474v1_fix HG2104_PATCH KN196474.1 NW_009646196.1
chr1_KN538360v1_fix HG1832_PATCH KN538360.1 NW_011332687.1
chr1_KN538361v1_fix HG2095_PATCH KN538361.1 NW_011332688.1
chr1_KQ031383v1_fix HG1342_HG2282_PATCH KQ031383.1 NW_012132914.1
chr1_KQ458382v1_alt HSCHR1_3_CTG3 KQ458382.1 NW_014040925.1
chr1_KQ458383v1_alt HSCHR1_4_CTG3 KQ458383.1 NW_014040926.1
chr1_KQ458384v1_alt HSCHR1_5_CTG32_1 KQ458384.1 NW_014040927.1
chr1_KQ983255v1_alt HSCHR1_5_CTG3 KQ983255.1 NW_015495298.1
chr1_KV880763v1_alt HSCHR1_6_CTG3 KV880763.1 NW_017852928.1
chr1_KZ208904v1_alt HSCHR1_8_CTG3 KZ208904.1 NW_018654706.1
chr1_KZ208905v1_alt HSCHR1_9_CTG3 KZ208905.1 NW_018654707.1
chr1_KZ208906v1_fix HG2002_PATCH KZ208906.1 NW_018654708.1
chr1_KZ559100v1_fix HG460_PATCH KZ559100.1 NW_019805487.1
chr2 2 2 CM000664.2 NC_000002.12
chr20 20 20 CM000682.2 NC_000020.11
chr20_GL383577v2_alt HSCHR20_1_CTG1 GL383577.2 NW_003315966.2
chr20_KI270869v1_alt HSCHR20_1_CTG2 KI270869.1 NT_187623.1
chr20_KI270870v1_alt HSCHR20_1_CTG3 KI270870.1 NT_187624.1
chr20_KI270871v1_alt HSCHR20_1_CTG4 KI270871.1 NT_187625.1
chr21 21 21 CM000683.2 NC_000021.9
chr21_GL383578v2_alt HSCHR21_1_CTG1_1 GL383578.2 NW_003315967.2
chr21_GL383579v2_alt HSCHR21_2_CTG1_1 GL383579.2 NW_003315968.2
chr21_GL383580v2_alt HSCHR21_3_CTG1_1 GL383580.2 NW_003315969.2
chr21_GL383581v2_alt HSCHR21_4_CTG1_1 GL383581.2 NW_003315970.2
chr21_KI270872v1_alt HSCHR21_5_CTG2 KI270872.1 NT_187626.1
chr21_KI270873v1_alt HSCHR21_6_CTG1_1 KI270873.1 NT_187627.1
chr21_KI270874v1_alt HSCHR21_8_CTG1_1 KI270874.1 NT_187628.1
chr21_ML143377v1_fix HG2513_PATCH ML143377.1 NW_021160023.1
chr22 22 22 CM000684.2 NC_000022.11
chr22_GL383582v2_alt HSCHR22_1_CTG1 GL383582.2 NW_003315971.2
chr22_GL383583v2_alt HSCHR22_1_CTG2 GL383583.2 NW_003315972.2
chr22_KB663609v1_alt HSCHR22_2_CTG1 KB663609.1 NW_004504305.1
chr22_KI270731v1_random HSCHR22_UNLOCALIZED_CTG1 KI270731.1 KI270731.1 NT_187386.1
chr22_KI270732v1_random HSCHR22_UNLOCALIZED_CTG2 KI270732.1 KI270732.1 NT_187387.1
chr22_KI270733v1_random HSCHR22_UNLOCALIZED_CTG3 KI270733.1 KI270733.1 NT_187388.1
chr22_KI270734v1_random HSCHR22_UNLOCALIZED_CTG4 KI270734.1 KI270734.1 NT_187389.1
chr22_KI270735v1_random HSCHR22_UNLOCALIZED_CTG5 KI270735.1 KI270735.1 NT_187390.1
chr22_KI270736v1_random HSCHR22_UNLOCALIZED_CTG6 KI270736.1 KI270736.1 NT_187391.1
chr22_KI270737v1_random HSCHR22_UNLOCALIZED_CTG7 KI270737.1 KI270737.1 NT_187392.1
chr22_KI270738v1_random HSCHR22_UNLOCALIZED_CTG8 KI270738.1 KI270738.1 NT_187393.1
chr22_KI270739v1_random HSCHR22_UNLOCALIZED_CTG9 KI270739.1 KI270739.1 NT_187394.1
chr22_KI270875v1_alt HSCHR22_1_CTG3 KI270875.1 NT_187629.1
chr22_KI270876v1_alt HSCHR22_1_CTG4 KI270876.1 NT_187630.1
chr22_KI270877v1_alt HSCHR22_1_CTG5 KI270877.1 NT_187631.1
chr22_KI270878v1_alt HSCHR22_1_CTG6 KI270878.1 NT_187632.1
chr22_KI270879v1_alt HSCHR22_1_CTG7 KI270879.1 NT_187633.1
chr22_KI270928v1_alt HSCHR22_3_CTG1 KI270928.1 NT_187682.1
chr22_KN196485v1_alt HSCHR22_4_CTG1 KN196485.1 NW_009646207.1
chr22_KN196486v1_alt HSCHR22_5_CTG1 KN196486.1 NW_009646208.1
chr22_KQ458387v1_alt HSCHR22_6_CTG1 KQ458387.1 NW_014040930.1
chr22_KQ458388v1_alt HSCHR22_7_CTG1 KQ458388.1 NW_014040931.1
chr22_KQ759761v1_alt HSCHR22_8_CTG1 KQ759761.1 NW_015148968.1
chr22_KQ759762v1_fix HG1311_PATCH KQ759762.1 NW_015148969.1
chr22_ML143378v1_fix HG1485_PATCH ML143378.1 NW_021160024.1
chr22_ML143379v1_fix HG494_PATCH ML143379.1 NW_021160025.1
chr22_ML143380v1_fix HG2512_PATCH ML143380.1 NW_021160026.1
chr2_GL383521v1_alt HSCHR2_1_CTG5 GL383521.1 NW_003315908.1
chr2_GL383522v1_alt HSCHR2_1_CTG7_2 GL383522.1 NW_003315909.1
chr2_GL582966v2_alt HSCHR2_2_CTG7_2 GL582966.2 NW_003571033.2
chr2_KI270715v1_random HSCHR2_RANDOM_CTG1 KI270715.1 KI270715.1 NT_187370.1
chr2_KI270716v1_random HSCHR2_RANDOM_CTG2 KI270716.1 KI270716.1 NT_187371.1
chr2_KI270767v1_alt HSCHR2_1_CTG15 KI270767.1 NT_187523.1
chr2_KI270768v1_alt HSCHR2_3_CTG7_2 KI270768.1 NT_187528.1
chr2_KI270769v1_alt HSCHR2_1_CTG1 KI270769.1 NT_187522.1
chr2_KI270770v1_alt HSCHR2_2_CTG1 KI270770.1 NT_187525.1
chr2_KI270771v1_alt HSCHR2_4_CTG7_2 KI270771.1 NT_187530.1
chr2_KI270772v1_alt HSCHR2_1_CTG7 KI270772.1 NT_187524.1
chr2_KI270773v1_alt HSCHR2_3_CTG1 KI270773.1 NT_187526.1
chr2_KI270774v1_alt HSCHR2_4_CTG1 KI270774.1 NT_187529.1
chr2_KI270775v1_alt HSCHR2_5_CTG7_2 KI270775.1 NT_187531.1
chr2_KI270776v1_alt HSCHR2_3_CTG15 KI270776.1 NT_187527.1
chr2_KI270893v1_alt HSCHR2_2_CTG15 KI270893.1 NT_187647.1
chr2_KI270894v1_alt HSCHR2_2_CTG7 KI270894.1 NT_187648.1
chr2_KN538362v1_fix HG2233_PATCH KN538362.1 NW_011332689.1
chr2_KN538363v1_fix HG2232_PATCH KN538363.1 NW_011332690.1
chr2_KQ031384v1_fix HG2290_PATCH KQ031384.1 NW_012132915.1
chr2_KQ983256v1_alt HSCHR2_6_CTG7_2 KQ983256.1 NW_015495299.1
chr2_KZ208907v1_alt HSCHR2_7_CTG7_2 KZ208907.1 NW_018654709.1
chr2_KZ208908v1_alt HSCHR2_8_CTG7_2 KZ208908.1 NW_018654710.1
chr2_ML143341v1_fix HG721_PATCH ML143341.1 NW_021159987.1
chr2_ML143342v1_fix HG1384_PATCH ML143342.1 NW_021159988.1
chr3 3 3 CM000665.2 NC_000003.12
chr3_GL000221v1_random HSCHR3UN_CTG2 GL000221.1 GL000221.1 NT_167215.1
chr3_GL383526v1_alt HSCHR3_1_CTG2_1 GL383526.1 NW_003315913.1
chr3_JH636055v2_alt HSCHR3_1_CTG1 JH636055.2 NW_003871060.2
chr3_KI270777v1_alt HSCHR3_2_CTG2_1 KI270777.1 NT_187533.1
chr3_KI270778v1_alt HSCHR3_3_CTG2_1 KI270778.1 NT_187536.1
chr3_KI270779v1_alt HSCHR3_1_CTG3 KI270779.1 NT_187532.1
chr3_KI270780v1_alt HSCHR3_4_CTG2_1 KI270780.1 NT_187537.1
chr3_KI270781v1_alt HSCHR3_5_CTG2_1 KI270781.1 NT_187538.1
chr3_KI270782v1_alt HSCHR3_2_CTG3 KI270782.1 NT_187534.1
chr3_KI270783v1_alt HSCHR3_3_CTG1 KI270783.1 NT_187535.1
chr3_KI270784v1_alt HSCHR3_9_CTG3 KI270784.1 NT_187539.1
chr3_KI270895v1_alt HSCHR3_3_CTG3 KI270895.1 NT_187649.1
chr3_KI270924v1_alt HSCHR3_4_CTG3 KI270924.1 NT_187678.1
chr3_KI270934v1_alt HSCHR3_5_CTG3 KI270934.1 NT_187688.1
chr3_KI270935v1_alt HSCHR3_6_CTG3 KI270935.1 NT_187689.1
chr3_KI270936v1_alt HSCHR3_7_CTG3 KI270936.1 NT_187690.1
chr3_KI270937v1_alt HSCHR3_8_CTG3 KI270937.1 NT_187691.1
chr3_KN196475v1_fix HG2066_PATCH KN196475.1 NW_009646197.1
chr3_KN196476v1_fix HG2022_PATCH KN196476.1 NW_009646198.1
chr3_KN538364v1_fix HG126_PATCH KN538364.1 NW_011332691.1
chr3_KQ031385v1_fix HG2235_PATCH KQ031385.1 NW_012132916.1
chr3_KQ031386v1_fix HG2237_PATCH KQ031386.1 NW_012132917.1
chr3_KV766192v1_fix HG2236_PATCH KV766192.1 NW_017363813.1
chr3_KZ208909v1_alt HSCHR3_4_CTG1 KZ208909.1 NW_018654711.1
chr3_KZ559101v1_alt HSCHR3_7_CTG2_1 KZ559101.1 NW_019805488.1
chr3_KZ559102v1_alt HSCHR3_8_CTG2_1 KZ559102.1 NW_019805489.1
chr3_KZ559103v1_alt HSCHR3_9_CTG2_1 KZ559103.1 NW_019805490.1
chr3_KZ559104v1_fix HG2133_PATCH KZ559104.1 NW_019805491.1
chr3_KZ559105v1_alt HSCHR3_6_CTG2_1 KZ559105.1 NW_019805492.1
chr3_ML143343v1_alt HSCHR3_5_CTG1 ML143343.1 NW_021159989.1
chr4 4 4 CM000666.2 NC_000004.12
chr4_GL000008v2_random HSCHR4_RANDOM_CTG4 GL000008.2 GL000008.2 NT_113793.3
chr4_GL000257v2_alt HSCHR4_1_CTG9 GL000257.2 NT_167250.2
chr4_GL383527v1_alt HSCHR4_1_CTG12 GL383527.1 NW_003315914.1
chr4_GL383528v1_alt HSCHR4_1_CTG6 GL383528.1 NW_003315915.1
chr4_KI270785v1_alt HSCHR4_2_CTG12 KI270785.1 NT_187542.1
chr4_KI270786v1_alt HSCHR4_3_CTG12 KI270786.1 NT_187543.1
chr4_KI270787v1_alt HSCHR4_1_CTG8_1 KI270787.1 NT_187541.1
chr4_KI270788v1_alt HSCHR4_4_CTG12 KI270788.1 NT_187544.1
chr4_KI270789v1_alt HSCHR4_5_CTG12 KI270789.1 NT_187545.1
chr4_KI270790v1_alt HSCHR4_1_CTG4 KI270790.1 NT_187540.1
chr4_KI270896v1_alt HSCHR4_6_CTG12 KI270896.1 NT_187650.1
chr4_KI270925v1_alt HSCHR4_7_CTG12 KI270925.1 NT_187679.1
chr4_KQ090013v1_alt HSCHR4_2_CTG4 KQ090013.1 NW_013171799.1
chr4_KQ090014v1_alt HSCHR4_8_CTG12 KQ090014.1 NW_013171800.1
chr4_KQ090015v1_alt HSCHR4_9_CTG12 KQ090015.1 NW_013171801.1
chr4_KQ983257v1_fix HG2023_PATCH KQ983257.1 NW_015495300.1
chr4_KQ983258v1_alt HSCHR4_11_CTG12 KQ983258.1 NW_015495301.1
chr4_KV766193v1_alt HSCHR4_12_CTG12 KV766193.1 NW_017363814.1
chr4_ML143344v1_fix HG699_PATCH ML143344.1 NW_021159990.1
chr4_ML143345v1_fix HG2525_PATCH ML143345.1 NW_021159991.1
chr4_ML143346v1_fix HG1299_PATCH ML143346.1 NW_021159992.1
chr4_ML143347v1_fix HG1298_PATCH ML143347.1 NW_021159993.1
chr4_ML143348v1_fix HG1296_PATCH ML143348.1 NW_021159994.1
chr4_ML143349v1_fix HG705_PATCH ML143349.1 NW_021159995.1
chr5 5 5 CM000667.2 NC_000005.10
chr5_GL000208v1_random HSCHR5_RANDOM_CTG1 GL000208.1 GL000208.1 NT_113948.1
chr5_GL339449v2_alt HSCHR5_2_CTG1_1 GL339449.2 NW_003315917.2
chr5_GL383530v1_alt HSCHR5_3_CTG1_1 GL383530.1 NW_003315918.1
chr5_GL383531v1_alt HSCHR5_1_CTG5 GL383531.1 NW_003315919.1
chr5_GL383532v1_alt HSCHR5_1_CTG1 GL383532.1 NW_003315920.1
chr5_GL949742v1_alt HSCHR5_2_CTG1 GL949742.1 NW_003571036.1
chr5_KI270791v1_alt HSCHR5_3_CTG1 KI270791.1 NT_187547.1
chr5_KI270792v1_alt HSCHR5_4_CTG1 KI270792.1 NT_187548.1
chr5_KI270793v1_alt HSCHR5_5_CTG1 KI270793.1 NT_187550.1
chr5_KI270794v1_alt HSCHR5_6_CTG1 KI270794.1 NT_187551.1
chr5_KI270795v1_alt HSCHR5_2_CTG5 KI270795.1 NT_187546.1
chr5_KI270796v1_alt HSCHR5_4_CTG1_1 KI270796.1 NT_187549.1
chr5_KI270897v1_alt HSCHR5_1_CTG1_1 KI270897.1 NT_187651.1
chr5_KI270898v1_alt HSCHR5_3_CTG5 KI270898.1 NT_187652.1
chr5_KN196477v1_alt HSCHR5_7_CTG1 KN196477.1 NW_009646199.1
chr5_KV575243v1_alt HSCHR5_8_CTG1 KV575243.1 NW_016107297.1
chr5_KV575244v1_fix HG30_PATCH KV575244.1 NW_016107298.1
chr5_KZ208910v1_alt HSCHR5_9_CTG1 KZ208910.1 NW_018654712.1
chr5_ML143350v1_fix HG1395_PATCH ML143350.1 NW_021159996.1
chr6 6 6 CM000668.2 NC_000006.12
chr6_GL000250v2_alt HSCHR6_MHC_APD_CTG1 GL000250.2 NT_167244.2
chr6_GL000251v2_alt HSCHR6_MHC_COX_CTG1 GL000251.2 NT_113891.3
chr6_GL000252v2_alt HSCHR6_MHC_DBB_CTG1 GL000252.2 NT_167245.2
chr6_GL000253v2_alt HSCHR6_MHC_MANN_CTG1 GL000253.2 NT_167246.2
chr6_GL000254v2_alt HSCHR6_MHC_MCF_CTG1 GL000254.2 NT_167247.2
chr6_GL000255v2_alt HSCHR6_MHC_QBL_CTG1 GL000255.2 NT_167248.2
chr6_GL000256v2_alt HSCHR6_MHC_SSTO_CTG1 GL000256.2 NT_167249.2
chr6_GL383533v1_alt HSCHR6_1_CTG2 GL383533.1 NW_003315921.1
chr6_KB021644v2_alt HSCHR6_1_CTG3 KB021644.2 NW_004166862.2
chr6_KI270758v1_alt HSCHR6_8_CTG1 KI270758.1 NT_187692.1
chr6_KI270797v1_alt HSCHR6_1_CTG4 KI270797.1 NT_187552.1
chr6_KI270798v1_alt HSCHR6_1_CTG5 KI270798.1 NT_187553.1
chr6_KI270799v1_alt HSCHR6_1_CTG6 KI270799.1 NT_187554.1
chr6_KI270800v1_alt HSCHR6_1_CTG7 KI270800.1 NT_187555.1
chr6_KI270801v1_alt HSCHR6_1_CTG8 KI270801.1 NT_187556.1
chr6_KI270802v1_alt HSCHR6_1_CTG9 KI270802.1 NT_187557.1
chr6_KN196478v1_fix HG2128_PATCH KN196478.1 NW_009646200.1
chr6_KQ031387v1_fix HG1651_PATCH KQ031387.1 NW_012132918.1
chr6_KQ090016v1_fix HG2072_PATCH KQ090016.1 NW_013171802.1
chr6_KQ090017v1_alt HSCHR6_1_CTG10 KQ090017.1 NW_013171803.1
chr6_KV766194v1_fix HG2121_PATCH KV766194.1 NW_017363815.1
chr6_KZ208911v1_fix HG2057_PATCH KZ208911.1 NW_018654713.1
chr6_ML143351v1_fix HG563_PATCH ML143351.1 NW_021159997.1
chr7 7 7 CM000669.2 NC_000007.14
chr7_GL383534v2_alt HSCHR7_1_CTG6 GL383534.2 NW_003315922.2
chr7_KI270803v1_alt HSCHR7_2_CTG6 KI270803.1 NT_187562.1
chr7_KI270804v1_alt HSCHR7_1_CTG1 KI270804.1 NT_187558.1
chr7_KI270805v1_alt HSCHR7_1_CTG7 KI270805.1 NT_187560.1
chr7_KI270806v1_alt HSCHR7_1_CTG4_4 KI270806.1 NT_187559.1
chr7_KI270807v1_alt HSCHR7_2_CTG7 KI270807.1 NT_187563.1
chr7_KI270808v1_alt HSCHR7_3_CTG6 KI270808.1 NT_187564.1
chr7_KI270809v1_alt HSCHR7_2_CTG4_4 KI270809.1 NT_187561.1
chr7_KI270899v1_alt HSCHR7_2_CTG1 KI270899.1 NT_187653.1
chr7_KQ031388v1_fix HG2239_PATCH KQ031388.1 NW_012132919.1
chr7_KV880764v1_fix HG2088_PATCH KV880764.1 NW_017852929.1
chr7_KV880765v1_fix HG2266_PATCH KV880765.1 NW_017852930.1
chr7_KZ208912v1_fix HG708_PATCH KZ208912.1 NW_018654714.1
chr7_KZ208913v1_alt HSCHR7_3_CTG4_4 KZ208913.1 NW_018654715.1
chr7_KZ559106v1_alt HSCHR7_3_CTG1 KZ559106.1 NW_019805493.1
chr7_ML143352v1_fix HG1309_PATCH ML143352.1 NW_021159998.1
chr8 8 8 CM000670.2 NC_000008.11
chr8_KI270810v1_alt HSCHR8_1_CTG7 KI270810.1 NT_187567.1
chr8_KI270811v1_alt HSCHR8_1_CTG1 KI270811.1 NT_187565.1
chr8_KI270812v1_alt HSCHR8_2_CTG1 KI270812.1 NT_187568.1
chr8_KI270813v1_alt HSCHR8_3_CTG1 KI270813.1 NT_187570.1
chr8_KI270814v1_alt HSCHR8_1_CTG6 KI270814.1 NT_187566.1
chr8_KI270815v1_alt HSCHR8_2_CTG7 KI270815.1 NT_187569.1
chr8_KI270816v1_alt HSCHR8_3_CTG7 KI270816.1 NT_187571.1
chr8_KI270817v1_alt HSCHR8_4_CTG7 KI270817.1 NT_187573.1
chr8_KI270818v1_alt HSCHR8_4_CTG1 KI270818.1 NT_187572.1
chr8_KI270819v1_alt HSCHR8_5_CTG7 KI270819.1 NT_187574.1
chr8_KI270820v1_alt HSCHR8_6_CTG7 KI270820.1 NT_187575.1
chr8_KI270821v1_alt HSCHR8_8_CTG1 KI270821.1 NT_187576.1
chr8_KI270822v1_alt HSCHR8_9_CTG1 KI270822.1 NT_187577.1
chr8_KI270900v1_alt HSCHR8_5_CTG1 KI270900.1 NT_187654.1
chr8_KI270901v1_alt HSCHR8_6_CTG1 KI270901.1 NT_187655.1
chr8_KI270926v1_alt HSCHR8_7_CTG1 KI270926.1 NT_187680.1
chr8_KV880766v1_fix HG2067_PATCH KV880766.1 NW_017852931.1
chr8_KV880767v1_fix HG2068_PATCH KV880767.1 NW_017852932.1
chr8_KZ208914v1_fix HG2419_PATCH KZ208914.1 NW_018654716.1
chr8_KZ208915v1_fix HG76_PATCH KZ208915.1 NW_018654717.1
chr8_KZ559107v1_alt HSCHR8_7_CTG7 KZ559107.1 NW_019805494.1
chr9 9 9 CM000671.2 NC_000009.12
chr9_GL383539v1_alt HSCHR9_1_CTG1 GL383539.1 NW_003315928.1
chr9_GL383540v1_alt HSCHR9_1_CTG2 GL383540.1 NW_003315929.1
chr9_GL383541v1_alt HSCHR9_1_CTG3 GL383541.1 NW_003315930.1
chr9_GL383542v1_alt HSCHR9_1_CTG4 GL383542.1 NW_003315931.1
chr9_KI270717v1_random HSCHR9_UNLOCALIZED_CTG1 KI270717.1 KI270717.1 NT_187372.1
chr9_KI270718v1_random HSCHR9_UNLOCALIZED_CTG2 KI270718.1 KI270718.1 NT_187373.1
chr9_KI270719v1_random HSCHR9_UNLOCALIZED_CTG3 KI270719.1 KI270719.1 NT_187374.1
chr9_KI270720v1_random HSCHR9_UNLOCALIZED_CTG4 KI270720.1 KI270720.1 NT_187375.1
chr9_KI270823v1_alt HSCHR9_1_CTG5 KI270823.1 NT_187578.1
chr9_KN196479v1_fix HG2030_PATCH KN196479.1 NW_009646201.1
chr9_KQ090018v1_alt HSCHR9_1_CTG6 KQ090018.1 NW_013171804.1
chr9_KQ090019v1_alt HSCHR9_1_CTG7 KQ090019.1 NW_013171805.1
chr9_ML143353v1_fix HG613_PATCH ML143353.1 NW_021159999.1
chrM MT MT J01415.2 NC_012920.1
chrUn_GL000195v1 HSCHRUN_RANDOM_CTG1 GL000195.1 GL000195.1 NT_113901.1
chrUn_GL000213v1 HSCHRUN_RANDOM_CTG2 GL000213.1 GL000213.1 NT_167208.1
chrUn_GL000214v1 HSCHRUN_RANDOM_CTG4 GL000214.1 GL000214.1 NT_167209.1
chrUn_GL000216v2 HSCHRUN_RANDOM_CTG6 GL000216.2 GL000216.2 NT_167211.2
chrUn_GL000218v1 HSCHRUN_RANDOM_CTG9 GL000218.1 GL000218.1 NT_113889.1
chrUn_GL000219v1 HSCHRUN_RANDOM_CTG10 GL000219.1 GL000219.1 NT_167213.1
chrUn_GL000220v1 HSCHRUN_RANDOM_CTG11 GL000220.1 GL000220.1 NT_167214.1
chrUn_GL000224v1 HSCHRUN_RANDOM_CTG16 GL000224.1 GL000224.1 NT_167218.1
chrUn_GL000226v1 HSCHRUN_RANDOM_CTG19 GL000226.1 GL000226.1 NT_167220.1
chrUn_KI270302v1 HSCHRUN_RANDOM_100 KI270302.1 KI270302.1 NT_187396.1
chrUn_KI270303v1 HSCHRUN_RANDOM_102 KI270303.1 KI270303.1 NT_187398.1
chrUn_KI270304v1 HSCHRUN_RANDOM_101 KI270304.1 KI270304.1 NT_187397.1
chrUn_KI270305v1 HSCHRUN_RANDOM_103 KI270305.1 KI270305.1 NT_187399.1
chrUn_KI270310v1 HSCHRUN_RANDOM_106 KI270310.1 KI270310.1 NT_187402.1
chrUn_KI270311v1 HSCHRUN_RANDOM_110 KI270311.1 KI270311.1 NT_187406.1
chrUn_KI270312v1 HSCHRUN_RANDOM_109 KI270312.1 KI270312.1 NT_187405.1
chrUn_KI270315v1 HSCHRUN_RANDOM_108 KI270315.1 KI270315.1 NT_187404.1
chrUn_KI270316v1 HSCHRUN_RANDOM_107 KI270316.1 KI270316.1 NT_187403.1
chrUn_KI270317v1 HSCHRUN_RANDOM_111 KI270317.1 KI270317.1 NT_187407.1
chrUn_KI270320v1 HSCHRUN_RANDOM_105 KI270320.1 KI270320.1 NT_187401.1
chrUn_KI270322v1 HSCHRUN_RANDOM_104 KI270322.1 KI270322.1 NT_187400.1
chrUn_KI270329v1 HSCHRUN_RANDOM_167 KI270329.1 KI270329.1 NT_187459.1
chrUn_KI270330v1 HSCHRUN_RANDOM_166 KI270330.1 KI270330.1 NT_187458.1
chrUn_KI270333v1 HSCHRUN_RANDOM_169 KI270333.1 KI270333.1 NT_187461.1
chrUn_KI270334v1 HSCHRUN_RANDOM_168 KI270334.1 KI270334.1 NT_187460.1
chrUn_KI270335v1 HSCHRUN_RANDOM_170 KI270335.1 KI270335.1 NT_187462.1
chrUn_KI270336v1 HSCHRUN_RANDOM_173 KI270336.1 KI270336.1 NT_187465.1
chrUn_KI270337v1 HSCHRUN_RANDOM_174 KI270337.1 KI270337.1 NT_187466.1
chrUn_KI270338v1 HSCHRUN_RANDOM_171 KI270338.1 KI270338.1 NT_187463.1
chrUn_KI270340v1 HSCHRUN_RANDOM_172 KI270340.1 KI270340.1 NT_187464.1
chrUn_KI270362v1 HSCHRUN_RANDOM_177 KI270362.1 KI270362.1 NT_187469.1
chrUn_KI270363v1 HSCHRUN_RANDOM_175 KI270363.1 KI270363.1 NT_187467.1
chrUn_KI270364v1 HSCHRUN_RANDOM_176 KI270364.1 KI270364.1 NT_187468.1
chrUn_KI270366v1 HSCHRUN_RANDOM_178 KI270366.1 KI270366.1 NT_187470.1
chrUn_KI270371v1 HSCHRUN_RANDOM_202 KI270371.1 KI270371.1 NT_187494.1
chrUn_KI270372v1 HSCHRUN_RANDOM_199 KI270372.1 KI270372.1 NT_187491.1
chrUn_KI270373v1 HSCHRUN_RANDOM_200 KI270373.1 KI270373.1 NT_187492.1
chrUn_KI270374v1 HSCHRUN_RANDOM_198 KI270374.1 KI270374.1 NT_187490.1
chrUn_KI270375v1 HSCHRUN_RANDOM_201 KI270375.1 KI270375.1 NT_187493.1
chrUn_KI270376v1 HSCHRUN_RANDOM_197 KI270376.1 KI270376.1 NT_187489.1
chrUn_KI270378v1 HSCHRUN_RANDOM_179 KI270378.1 KI270378.1 NT_187471.1
chrUn_KI270379v1 HSCHRUN_RANDOM_180 KI270379.1 KI270379.1 NT_187472.1
chrUn_KI270381v1 HSCHRUN_RANDOM_194 KI270381.1 KI270381.1 NT_187486.1
chrUn_KI270382v1 HSCHRUN_RANDOM_196 KI270382.1 KI270382.1 NT_187488.1
chrUn_KI270383v1 HSCHRUN_RANDOM_190 KI270383.1 KI270383.1 NT_187482.1
chrUn_KI270384v1 HSCHRUN_RANDOM_192 KI270384.1 KI270384.1 NT_187484.1
chrUn_KI270385v1 HSCHRUN_RANDOM_195 KI270385.1 KI270385.1 NT_187487.1
chrUn_KI270386v1 HSCHRUN_RANDOM_188 KI270386.1 KI270386.1 NT_187480.1
chrUn_KI270387v1 HSCHRUN_RANDOM_183 KI270387.1 KI270387.1 NT_187475.1
chrUn_KI270388v1 HSCHRUN_RANDOM_186 KI270388.1 KI270388.1 NT_187478.1
chrUn_KI270389v1 HSCHRUN_RANDOM_181 KI270389.1 KI270389.1 NT_187473.1
chrUn_KI270390v1 HSCHRUN_RANDOM_182 KI270390.1 KI270390.1 NT_187474.1
chrUn_KI270391v1 HSCHRUN_RANDOM_189 KI270391.1 KI270391.1 NT_187481.1
chrUn_KI270392v1 HSCHRUN_RANDOM_193 KI270392.1 KI270392.1 NT_187485.1
chrUn_KI270393v1 HSCHRUN_RANDOM_191 KI270393.1 KI270393.1 NT_187483.1
chrUn_KI270394v1 HSCHRUN_RANDOM_187 KI270394.1 KI270394.1 NT_187479.1
chrUn_KI270395v1 HSCHRUN_RANDOM_184 KI270395.1 KI270395.1 NT_187476.1
chrUn_KI270396v1 HSCHRUN_RANDOM_185 KI270396.1 KI270396.1 NT_187477.1
chrUn_KI270411v1 HSCHRUN_RANDOM_113 KI270411.1 KI270411.1 NT_187409.1
chrUn_KI270412v1 HSCHRUN_RANDOM_112 KI270412.1 KI270412.1 NT_187408.1
chrUn_KI270414v1 HSCHRUN_RANDOM_114 KI270414.1 KI270414.1 NT_187410.1
chrUn_KI270417v1 HSCHRUN_RANDOM_119 KI270417.1 KI270417.1 NT_187415.1
chrUn_KI270418v1 HSCHRUN_RANDOM_116 KI270418.1 KI270418.1 NT_187412.1
chrUn_KI270419v1 HSCHRUN_RANDOM_115 KI270419.1 KI270419.1 NT_187411.1
chrUn_KI270420v1 HSCHRUN_RANDOM_117 KI270420.1 KI270420.1 NT_187413.1
chrUn_KI270422v1 HSCHRUN_RANDOM_120 KI270422.1 KI270422.1 NT_187416.1
chrUn_KI270423v1 HSCHRUN_RANDOM_121 KI270423.1 KI270423.1 NT_187417.1
chrUn_KI270424v1 HSCHRUN_RANDOM_118 KI270424.1 KI270424.1 NT_187414.1
chrUn_KI270425v1 HSCHRUN_RANDOM_122 KI270425.1 KI270425.1 NT_187418.1
chrUn_KI270429v1 HSCHRUN_RANDOM_123 KI270429.1 KI270429.1 NT_187419.1
chrUn_KI270435v1 HSCHRUN_RANDOM_128 KI270435.1 KI270435.1 NT_187424.1
chrUn_KI270438v1 HSCHRUN_RANDOM_129 KI270438.1 KI270438.1 NT_187425.1
chrUn_KI270442v1 HSCHRUN_RANDOM_124 KI270442.1 KI270442.1 NT_187420.1
chrUn_KI270448v1 HSCHRUN_RANDOM_203 KI270448.1 KI270448.1 NT_187495.1
chrUn_KI270465v1 HSCHRUN_RANDOM_126 KI270465.1 KI270465.1 NT_187422.1
chrUn_KI270466v1 HSCHRUN_RANDOM_125 KI270466.1 KI270466.1 NT_187421.1
chrUn_KI270467v1 HSCHRUN_RANDOM_127 KI270467.1 KI270467.1 NT_187423.1
chrUn_KI270468v1 HSCHRUN_RANDOM_130 KI270468.1 KI270468.1 NT_187426.1
chrUn_KI270507v1 HSCHRUN_RANDOM_141 KI270507.1 KI270507.1 NT_187437.1
chrUn_KI270508v1 HSCHRUN_RANDOM_134 KI270508.1 KI270508.1 NT_187430.1
chrUn_KI270509v1 HSCHRUN_RANDOM_132 KI270509.1 KI270509.1 NT_187428.1
chrUn_KI270510v1 HSCHRUN_RANDOM_131 KI270510.1 KI270510.1 NT_187427.1
chrUn_KI270511v1 HSCHRUN_RANDOM_139 KI270511.1 KI270511.1 NT_187435.1
chrUn_KI270512v1 HSCHRUN_RANDOM_136 KI270512.1 KI270512.1 NT_187432.1
chrUn_KI270515v1 HSCHRUN_RANDOM_140 KI270515.1 KI270515.1 NT_187436.1
chrUn_KI270516v1 HSCHRUN_RANDOM_135 KI270516.1 KI270516.1 NT_187431.1
chrUn_KI270517v1 HSCHRUN_RANDOM_142 KI270517.1 KI270517.1 NT_187438.1
chrUn_KI270518v1 HSCHRUN_RANDOM_133 KI270518.1 KI270518.1 NT_187429.1
chrUn_KI270519v1 HSCHRUN_RANDOM_137 KI270519.1 KI270519.1 NT_187433.1
chrUn_KI270521v1 HSCHRUN_RANDOM_204 KI270521.1 KI270521.1 NT_187496.1
chrUn_KI270522v1 HSCHRUN_RANDOM_138 KI270522.1 KI270522.1 NT_187434.1
chrUn_KI270528v1 HSCHRUN_RANDOM_144 KI270528.1 KI270528.1 NT_187440.1
chrUn_KI270529v1 HSCHRUN_RANDOM_143 KI270529.1 KI270529.1 NT_187439.1
chrUn_KI270530v1 HSCHRUN_RANDOM_145 KI270530.1 KI270530.1 NT_187441.1
chrUn_KI270538v1 HSCHRUN_RANDOM_147 KI270538.1 KI270538.1 NT_187443.1
chrUn_KI270539v1 HSCHRUN_RANDOM_146 KI270539.1 KI270539.1 NT_187442.1
chrUn_KI270544v1 HSCHRUN_RANDOM_148 KI270544.1 KI270544.1 NT_187444.1
chrUn_KI270548v1 HSCHRUN_RANDOM_149 KI270548.1 KI270548.1 NT_187445.1
chrUn_KI270579v1 HSCHRUN_RANDOM_158 KI270579.1 KI270579.1 NT_187450.1
chrUn_KI270580v1 HSCHRUN_RANDOM_156 KI270580.1 KI270580.1 NT_187448.1
chrUn_KI270581v1 HSCHRUN_RANDOM_157 KI270581.1 KI270581.1 NT_187449.1
chrUn_KI270582v1 HSCHRUN_RANDOM_162 KI270582.1 KI270582.1 NT_187454.1
chrUn_KI270583v1 HSCHRUN_RANDOM_154 KI270583.1 KI270583.1 NT_187446.1
chrUn_KI270584v1 HSCHRUN_RANDOM_161 KI270584.1 KI270584.1 NT_187453.1
chrUn_KI270587v1 HSCHRUN_RANDOM_155 KI270587.1 KI270587.1 NT_187447.1
chrUn_KI270588v1 HSCHRUN_RANDOM_163 KI270588.1 KI270588.1 NT_187455.1
chrUn_KI270589v1 HSCHRUN_RANDOM_159 KI270589.1 KI270589.1 NT_187451.1
chrUn_KI270590v1 HSCHRUN_RANDOM_160 KI270590.1 KI270590.1 NT_187452.1
chrUn_KI270591v1 HSCHRUN_RANDOM_165 KI270591.1 KI270591.1 NT_187457.1
chrUn_KI270593v1 HSCHRUN_RANDOM_164 KI270593.1 KI270593.1 NT_187456.1
chrUn_KI270741v1 HSCHRUN_RANDOM_CTG17 KI270741.1 KI270741.1 NT_187497.1
chrUn_KI270742v1 HSCHRUN_RANDOM_CTG42 KI270742.1 KI270742.1 NT_187513.1
chrUn_KI270743v1 HSCHRUN_RANDOM_CTG20 KI270743.1 KI270743.1 NT_187498.1
chrUn_KI270744v1 HSCHRUN_RANDOM_CTG21 KI270744.1 KI270744.1 NT_187499.1
chrUn_KI270745v1 HSCHRUN_RANDOM_CTG22 KI270745.1 KI270745.1 NT_187500.1
chrUn_KI270746v1 HSCHRUN_RANDOM_CTG23 KI270746.1 KI270746.1 NT_187501.1
chrUn_KI270747v1 HSCHRUN_RANDOM_CTG24 KI270747.1 KI270747.1 NT_187502.1
chrUn_KI270748v1 HSCHRUN_RANDOM_CTG25 KI270748.1 KI270748.1 NT_187503.1
chrUn_KI270749v1 HSCHRUN_RANDOM_CTG26 KI270749.1 KI270749.1 NT_187504.1
chrUn_KI270750v1 HSCHRUN_RANDOM_CTG27 KI270750.1 KI270750.1 NT_187505.1
chrUn_KI270751v1 HSCHRUN_RANDOM_CTG28 KI270751.1 KI270751.1 NT_187506.1
chrUn_KI270752v1 HSCHRUN_RANDOM_CTG29 KI270752.1 KI270752.1
chrUn_KI270753v1 HSCHRUN_RANDOM_CTG30 KI270753.1 KI270753.1 NT_187508.1
chrUn_KI270754v1 HSCHRUN_RANDOM_CTG33 KI270754.1 KI270754.1 NT_187509.1
chrUn_KI270755v1 HSCHRUN_RANDOM_CTG34 KI270755.1 KI270755.1 NT_187510.1
chrUn_KI270756v1 HSCHRUN_RANDOM_CTG35 KI270756.1 KI270756.1 NT_187511.1
chrUn_KI270757v1 HSCHRUN_RANDOM_CTG36 KI270757.1 KI270757.1 NT_187512.1
chrX X X CM000685.2 NC_000023.11
chrX_KI270880v1_alt HSCHRX_1_CTG3 KI270880.1 NT_187634.1
chrX_KI270881v1_alt HSCHRX_2_CTG12 KI270881.1 NT_187635.1
chrX_KI270913v1_alt HSCHRX_2_CTG3 KI270913.1 NT_187667.1
chrX_KV766199v1_alt HSCHRX_3_CTG7 KV766199.1 NW_017363820.1
chrX_ML143381v1_fix HG439_PATCH ML143381.1 NW_021160027.1
chrX_ML143382v1_fix HG1506_PATCH ML143382.1 NW_021160028.1
chrX_ML143383v1_fix HG1507_PATCH ML143383.1 NW_021160029.1
chrX_ML143384v1_fix HG1509_PATCH ML143384.1 NW_021160030.1
chrX_ML143385v1_fix HG1466_PATCH ML143385.1 NW_021160031.1
chrY Y Y CM000686.2 NC_000024.10
chrY_KI270740v1_random HSCHRY_RANDOM_CTG1 KI270740.1 KI270740.1 NT_187395.1
chrY_KN196487v1_fix HG2062_PATCH KN196487.1 NW_009646209.1
chrY_KZ208923v1_fix HG1531_PATCH KZ208923.1 NW_018654725.1
chrY_KZ208924v1_fix HG1535_PATCH KZ208924.1 NW_018654726.1