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  • MethylDackel Public

    Forked from dpryan79/MethylDackel

    A (mostly) universal methylation extractor for BS-seq experiments.

    C MIT License Updated Oct 20, 2024

  • ichorCNA Public

    Forked from broadinstitute/ichorCNA

    Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.

    R GNU General Public License v3.0 Updated Mar 20, 2024

  • alleleCount Public

    Forked from cancerit/alleleCount

    Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each allele [ACGT] at that location (given any filter settings)

    C GNU Affero General Public License v3.0 Updated Feb 13, 2024

  • addin_rstudio Public

    R Updated Oct 26, 2020