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Aligarh Muslim University
- India
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SCAPP
SCAPP PublicForked from Shamir-Lab/SCAPP
SCAPP is a plasmid assembly tool. A preprint describing this tool is available at: https://www.biorxiv.org/content/10.1101/2020.01.12.903252v1
Python 1
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snippy
snippy PublicForked from tseemann/snippy
✂️ ⚡ Rapid haploid variant calling and core genome alignment
Perl 1
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PlasClass-1
PlasClass-1 PublicForked from Shamir-Lab/PlasClass
A tool to classify sequences of plasmid or chromosomal origin. A paper describing this tool is available at: https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1007781
Python
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rgi
rgi PublicForked from arpcard/rgi
Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.
Python
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