📮 A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool For Genome-Wide Association Study

Lima - Demultiplex Barcoded PacBio Samples

A One-Click System for Analyzing Loop-Resolution Hi-C Experiments

Tutorials on phylogenetic and phylogenomic inference

ALLHiC: phasing and scaffolding polyploid genomes based on Hi-C data

HiC-Pro: An optimized and flexible pipeline for Hi-C data processing

Next generation sequencing reads de novo assembler.

Pipeline that takes a pop vcf, runs and plot TreeMix

Scripts to prepare TreeMix input from diploid or polyploid vcf input and visualize the output

Linuxbrew Treemix Formula

Converts plink.frq.strat into treemix format.

RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors

end of integrOmics package

❗ This is a read-only mirror of the CRAN R package repository. iCluster — Integrative clustering of multiple genomic data types

tool for the analysis of multimodal high-throughput data

Development repository for the Bioconductor package 'mixOmics '

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/tRanslatome.html Bug Reports: https://support.bioconductor.org/p/ne…

输入DOI下载SCI

download papers' pdf from http://sci-hub.cc/ automatically

om reseq workflow based on nextflow

A customizable tool for simulation of evolve and resequence experiments on a quantitative trait

Rice resequencing workflow for RAP-DB

单细胞转录组实战

你可以使用该脚本对重测序的vcf结果进行群体分析，有进化树分析，群体结构分析，PCA分析,LD分析，需要的软件可以直接在config脚本里面修改它的路径

整理常用的群体遗传学分析流程和脚本

Shiny apps for teaching Population Genetics

A primer for computational tools to analyze genetics of populations in R

A pipeline that accepts a VCF file to run through Admixture