An audio server, programming language, and IDE for sound synthesis and algorithmic composition.

Stan development repository. The master branch contains the current release. The develop branch contains the latest stable development. See the Developer Process Wiki for details.

nanoflann: a C++11 header-only library for Nearest Neighbor (NN) search with KD-trees

Stanford Network Analysis Platform (SNAP) is a general purpose network analysis and graph mining library.

automatic differentiation made easier for C++

OpenMM is a toolkit for molecular simulation using high performance GPU code.

OpenGV is a collection of computer vision methods for solving geometric vision problems. It is hosted and maintained by the Mobile Perception Lab of ShanghaiTech.

A header-only C++ library for large scale eigenvalue problems

Public/backup repository of the GROMACS molecular simulation toolkit. Please do not mine the metadata blindly; we use https://gitlab.com/gromacs/gromacs for code review and issue tracking.

A header-only C++ library for deep neural networks

Development version of plumed 2

macromolecular crystallography library and utilities

Biomolecular simulation trajectory/data analysis.

C++ Accelerated Python Diffusion Maps Library

GPU accelerating computing for Bayesian inference of electron microscopy images. BioEM is a publicly available software that enables the characterization of structural models with respect to indivi…