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A beautiful, simple, clean, and responsive Jekyll theme for academics

HTML 11,748 11,432 Updated Jan 3, 2025

The engine of the RenderCV App

Python 2,107 180 Updated Jan 6, 2025

RJH Curriculum Vitae

TeX 94 71 Updated Dec 25, 2024

A Python package to visualise neuroanatomical data in atlas space

Python 554 81 Updated Jan 6, 2025

a python api for higlass

Jupyter Notebook 11 1 Updated Mar 15, 2023

Interactive 2D scatter plot widget for Jupyter Lab and Notebook. Scales to millions of points!

Python 398 17 Updated Jan 1, 2025

Comparison of methods for trajectory inference on single-cell data 🥇

R 203 42 Updated Aug 30, 2023

Productivity Tools for Plotly + Pandas

Jupyter Notebook 3,041 675 Updated Jul 3, 2024

Access to Biological Web Services from Python.

Python 286 61 Updated Dec 24, 2024

A modern, high customizable, responsive Jekyll theme for documentation with built-in search.

SCSS 7,769 3,702 Updated Jan 6, 2025

Use ImageJ from Python

Python 482 82 Updated Dec 27, 2024

📝 A nicely formatted LaTeX preprint template

TeX 557 75 Updated Jul 7, 2023

Official implementation of the TabPFN paper (https://arxiv.org/abs/2207.01848) and the tabpfn package.

Python 1,260 113 Updated Oct 23, 2024

scDIOR: Single cell data IO softwaRe

HTML 138 11 Updated Feb 15, 2022

Tab complete for HDF5 files

Shell 6 2 Updated Jun 2, 2020
Jupyter Notebook 102 28 Updated Apr 24, 2024

Python-based UCSC genome browser snapshot-taker and gallery-maker

JavaScript 12 3 Updated May 21, 2024

🧬 gget enables efficient querying of genomic reference databases

Python 961 75 Updated Jan 1, 2025

A simple and efficient tool to parallelize Pandas operations on all available CPUs

Python 3,714 214 Updated Jul 9, 2024

A small library for automatically adjustment of text position in matplotlib plots to minimize overlaps.

Jupyter Notebook 1,515 88 Updated Oct 31, 2024

Performs memory-efficient reservoir sampling on very large input files delimited by newlines

C 69 12 Updated Mar 6, 2020

Dataframes powered by a multithreaded, vectorized query engine, written in Rust

Rust 31,248 2,032 Updated Jan 6, 2025

Embed Plotly Dash into your Flask applications. Docker-based Flask project wrapping Plotly's Dash. Include multiple Dash apps in a single Flask app.

Python 73 19 Updated Sep 27, 2023

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

Go 1,342 159 Updated Nov 25, 2024

Draw UpSet plots with Matplotlib

Python 333 65 Updated May 2, 2024

2 ~ 6 sets venn diagram for python

Python 323 119 Updated May 16, 2024

👁️ Python library to plot DNA sequence features (e.g. from Genbank files)

Python 608 93 Updated Aug 19, 2024

Genomic interval operations on Pandas DataFrames

Python 176 30 Updated Jan 6, 2025

Degenerate Codon Design

Python 13 1 Updated Feb 13, 2020

The tools for your .cool's

Jupyter Notebook 143 51 Updated Oct 21, 2024
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