This is a book on rmarkdown, aimed for scientists. It was initially developed as a 3 hour workshop, but is now developed into a resource that will grow and change over time as a living book.
This book aims to teach the following:
- Getting started with your own R Markdown document
- Improve workflow:
- With rstudio projects
- Using keyboard shortcuts
- Export your R Markdown document to PDF, HTML, and Microsoft Word
- Better manage figures and tables
- Reference figures and tables in text so that they dynamically update
- Create captions for figures and tables
- Change the size and type of figures
- Save the figures to disk when creating an rmarkdown document
- Work with equations
- inline and display
- caption equations
- reference equations
- Manage bibliographies
- Cite articles in text
- generate bibliographies
- Change bibliography styles
- Debug and handle common errors with rmarkdown
- Next steps in working with rmarkdown - how to extend yourself to other rmarkdown formats
This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.
