Genomic epidemiologist at Washington Department of Health, working to support genomic epi integration into public health practice. Maintains @northwest-pgcoe.
-
-
covidtracker-data-thoughts Public
Repository stubbing out my initial data analysis plans for the CovidTracker data, to be taken over by whomever at Biohub would like to pick this up in my absence.
-
-
-
-
beast-toolbox Public
Notebooks, xmls, and other resources as examples of different custom BEAST analyses
UpdatedOct 8, 2019 -
-
-
augur Public
Forked from nextstrain/augurPipeline components for real-time virus analysis
Python GNU Affero General Public License v3.0 UpdatedSep 29, 2017 -
Zika-cases-PAHO Public
Forked from andersen-lab/zika-epidemiologyZika case numbers from PAHO
Python UpdatedJul 14, 2017 -
ihnv Public
Code for sequences/evolutionary analysis of U genogroup IHNV
Jupyter Notebook UpdatedOct 26, 2016 -
zibraproject.github.io Public
Forked from zibraproject/zibraproject.github.ioZika Sequencing Consortium
JavaScript UpdatedSep 6, 2016 -
-