Dynamic programming algorithms for exact linear clustering in networks.

A modern, highly customizable, responsive Jekyll template for course websites.

Learning Data Science, a textbook.

Fall 2021 Public Materials

Package for sampling real algebraic varieties.

📊 Save matplotlib figures as TikZ/PGFplots for smooth integration into LaTeX.

CTLN Basic

list of brain networks ready to be downloaded for your brainhacking pleasure

A library to generate LaTeX expression from Python code.

Clustergram - Visualization and diagnostics for cluster analysis in Python

Noisy network measurement with stan

Generalized Circular Coordinates

A curated list of topological data analysis (TDA) resources and links.

A collection of color palettes saved for personal use.

Ripser++: GPU-accelerated computation of Vietoris–Rips persistence barcodes

An open access book on scientific visualization using python and matplotlib

Outline for planning PhD projects

🎥 Matplotlib animations made easy

Animation engine for explanatory math videos

A python library for intelligently building networks and network embeddings, and for analyzing connected data.

persistent homology on embedded time series

Graph Neural Network Library for PyTorch

The GUDHI library is a generic open source C++ library, with a Python interface, for Topological Data Analysis (TDA) and Higher Dimensional Geometry Understanding.

TTK - Topological Data Analysis and Visualization - Source Code

Below are some simple methods for exiting vim.

Implementation of Persistent Homology Localization Algorithms

Course materials for: Introduction to Data Science and Programming

The open-source toolbox of easy-to-use topological data analysis tools, developed by GDA.

GitHub Action to compile LaTeX documents

Extensions for BrainIAK such as for Topological Data Analysis.