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build: explicit conda deps and develop --no-deps to allow setup.py to…
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… run in conda build without installing install_requires
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amcpherson committed Jun 1, 2022
1 parent 9224ad4 commit 17d4a85
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2 changes: 1 addition & 1 deletion conda/remixt/build.sh
Original file line number Diff line number Diff line change
Expand Up @@ -4,4 +4,4 @@ export CFLAGS="-I$PREFIX/include"
export LDFLAGS="-L$PREFIX/lib"

# Build and install python package
$PYTHON setup.py install
$PYTHON setup.py develop --no-deps
45 changes: 23 additions & 22 deletions conda/remixt/meta.yaml
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Expand Up @@ -2,43 +2,44 @@

package:
name: remixt
version: 0.5.13
version: 0.5.19
# version: {{ data.get('version') }}

source:
git_url: git://github.com/amcpherson/remixt.git
git_rev: v0.5.13
git_url: https://github.com/amcpherson/remixt.git
git_rev: v0.5.19
# git_rev: v{{ data.get('version') }}
# path: ../../

build:
number: 0

requirements:
build:
- python
- python ==3.10.4
- cython
- numpy
- numpy ==1.22.3
- boost_source ==1.60.0
- zlib
- bzip2
- zlib ==1.2.12
- bzip2 ==1.0.8

run:
- python
- numpy
- python ==3.10.4
- numpy ==1.22.3
- scipy
- zlib
- bzip2
- pandas >=0.17.1
- pytables
- pypeliner >=0.4.1
- statsmodels
- scikit-learn
- pyyaml
- matplotlib
- seaborn
- bokeh >=0.11.1
- shapeit
- samtools
- zlib ==1.2.12
- bzip2 ==1.0.8
- pandas ==1.4.2
- pytables ==3.7.0
- pypeliner ==0.6.2
- statsmodels ==0.13.2
- scikit-learn ==1.0.1
- pyyaml ==6.0
- matplotlib ==3.5.1
- seaborn ==0.11.2
- bokeh ==2.4.2
- shapeit ==2.r904
- samtools ==1.6

about:
home: http://bitbucket.org/dranew/remixt
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