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params: previous max copy number too low
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amcpherson committed Apr 22, 2021
1 parent c8e5d6c commit db5e9a4
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2 changes: 1 addition & 1 deletion remixt/defaults.py
Original file line number Diff line number Diff line change
Expand Up @@ -99,7 +99,7 @@
fit_method = 'hmm_graph'

# Maximum copy number in state space for HMM
max_copy_number = 8
max_copy_number = 12

# Tumour mixture fractions for initialization of haploid depth
# parameter optimization
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