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single_cell_saturate Public
Forked from zolotarovgl/10x_saturateCompute saturation curve for single cell sequencing data
Python UpdatedOct 2, 2024 -
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shinyapps-package-dependencies Public
Forked from rstudio/shinyapps-package-dependenciesCollection of bash scripts that install R package system dependencies
R Other UpdatedMay 12, 2022 -
SEACells Public
Forked from dpeerlab/SEACellsSEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data
Jupyter Notebook GNU General Public License v2.0 UpdatedMay 9, 2022 -
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ArchR Public
Forked from GreenleafLab/ArchRArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
R MIT License UpdatedDec 14, 2020 -
solo-in-drops Public
Forked from jsimonas/solo-in-dropsSTARsolo wrapper for inDrops analysis
Nextflow MIT License UpdatedDec 11, 2020 -
bap Public
Forked from caleblareau/bapBead single-cell atac processing
Python MIT License UpdatedDec 7, 2020 -
NGSeminar Public
NGSeminar: R - functions and fundamentals
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germfree-mice-RNA-analysis Public
Differential gene expression and GAGE analysis for KEGG pathways
R UpdatedMar 16, 2020 -
targeted-ngs-qc Public
Inspect capture efficiency and sequencing coverage of the targeted regions from mapped sequencing reads.
R UpdatedMay 10, 2019 -
mass_clone Public
Forked from konzy/mass_cloneThis is a shell script that will clone multiple repositories. The intended usage is for GitHub Classroom to be able to clone all repos of a certain assignment. The script will create a folder based…
Shell MIT License UpdatedOct 31, 2018