🌱 The Energy Grass Database (EGDB) : A Comprehensive Multi-Omics Database for Energy Grasses and the Epigenomic Atlas of Pearl Millet 🌾
Welcome to The Energy Grass Database (EGDB)! 🎉
EGDB is a comprehensive database designed for researchers working with key energy grass genera, such as Cenchrus, Miscanthus, and Arundo. 🌾
This platform integrates genomic, transcriptomic, epigenomic, and phenotypic data, filling critical gaps in bioenergy research and advancing studies on sustainable energy crops.
Energy grasses are champions of renewable energy 🌍, offering incredible potential for bioenergy production, carbon capture, and ecological restoration. EGDB provides user-friendly tools and datasets to unlock the scientific potential of these crops. 🌱✨
Dive into species-specific data with:
- 🌿 Detailed genome sequences and annotations
- 📜 Comprehensive literature and data resources
Easily find the data you need:
- 🌟 Search by gene ID or chromosomal regions
- 📊 Retrieve sequence data and gene annotations
EGDB employs iTAK software to identify:
- 🧬 Transcription factor families
- ✨ Kinase families critical for regulatory studies
Design primers effortlessly!
- Generate PCR-ready primers
- Support for CRISPR genome editing experiments
EGDB introduces an unparalleled epigenomic map for pearl millet, featuring:
- 📂 163 Gb of sequencing data across nine chromatin features
- 🧬 Annotation of regulatory elements
- ✨ Insights into transcriptional regulation mechanisms
EGDB includes:
- 🔍 BLAST for sequence homology searches
- 🖥️ Genome Browser for multi-omics visualization
- ✂️ CRISPR Design for precision genome editing
EGDB is an invaluable resource for:
- 🌾 Unraveling regulatory mechanisms in energy grasses
- 🌟 Improving bioenergy crop efficiency
- 🌱 Studying ecological adaptation and carbon capture
This platform empowers researchers in bioenergy, crop science, and sustainability efforts, contributing to a greener planet. 🌍✨
🌐 Visit: EGDB
Set up EGDB locally for development:
git clone https://github.com/ashelylinluo/epigenetic-atlas
cd EGDB- 👩🔬 Research Team: Transcriptional Systems Biology Group
- 📧 Email: [email protected]
- 📍 Address: Fujian Agriculture and Forestry University, No.15 Shangxiadian Road, Cangshan District, Fuzhou 350002, China
🌱 We welcome your feedback and collaboration! 💬
Visit The Energy Grass Database (EGDB) to explore further.
✨ Let's advance bioenergy research together with EGDB! 🚀