asmagen
Follow
-
-
-
notebook_whisperer Public
Forked from matthewclegg/notebook_whispererAn LLM-based coding assistant to help with the construction of Jupyter notebooks
Jupyter Notebook MIT License UpdatedJul 30, 2023 -
SPAGEfinder Public
Computational approach to identify Survival associated Pairwise Gene Expression states.
-
robustSingleCell Public
Robust single cell clustering and comparison of population compositions across tissues and experimental models via similarity analysis.
-
-
-
-
CancerApp Public
Web portal for browsing predicted gene interactions defined by EnGIne (Encyclopedia of Genetic Interactions)
JavaScript UpdatedJun 25, 2020 -
visium-clustergrammer2 Public
Forked from ismms-himc/visium-clustergrammer2Jupyter Notebook UpdatedFeb 3, 2020 -
martin_et_al_cell_2019 Public
Forked from effiken/martin_et_al_cell_2019Scripts and data files used to generate the figures of the Crohn's single-cell RNA-seq paper "Single-cell analysis of Crohn’s disease lesions identifies a pathogenic cellular module associated with…
R UpdatedAug 29, 2019 -
-
-
awesome-single-cell Public
Forked from seandavi/awesome-single-cellList of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
-
SC-UsersGroup Public
Forked from NIH-IRP-SingleCell/SC-UsersGroupInfo about NIH-IRP Single Cell Users Group events
UpdatedMar 7, 2019 -
-
hierarchicalSingleCell Public
An R package to robustly identify subpopulations in single-cell RNASeq data.