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needletail Public
Forked from onecodex/needletailFast FASTX parsing and k-mer methods in Rust
Rust MIT License UpdatedFeb 1, 2025 -
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ncbi-taxonomy-bot Public
Bot that toots when NCBI updates their taxonomy database
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taxonomy-time-machine Public
Forked from onecodex/taxonomy-time-machineNCBI Taxonomy History Browser
Python MIT License UpdatedDec 12, 2024 -
snakemake-hello-world Public
(demo) Minimal working map-reduce pattern in Snakemake (with containerization)
Python UpdatedDec 5, 2024 -
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rust-libgpod Public
Access iPod database using Rust
Rust GNU General Public License v2.0 UpdatedNov 1, 2024 -
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mag Public
Forked from nf-core/magAssembly and binning of metagenomes
Nextflow MIT License UpdatedSep 30, 2024 -
nextflow-demo-barebones Public
Nextflow pipeline w/ modules sans nf-core
Nextflow UpdatedSep 27, 2024 -
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obsidian-periodic-notes Public
Forked from liamcain/obsidian-periodic-notesCreate/manage your daily, weekly, and monthly notes in Obsidian
TypeScript MIT License UpdatedAug 23, 2024 -
onecodex Public
Forked from onecodex/onecodexCommand line interface and Python client library for the One Codex API
Python MIT License UpdatedJun 18, 2024 -
homebrew-bio Public
Forked from brewsci/homebrew-bio🍺🔬 Bioinformatics formulae for the Homebrew package manager (macOS and Linux)
Ruby Other UpdatedJun 17, 2024 -
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downloads Public
💾 Happy file downloading for Python
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pb-metagenomics-tools Public
Forked from PacificBiosciences/pb-metagenomics-toolsTools and pipelines tailored to using PacBio HiFi Reads for metagenomics
HTML BSD 3-Clause Clear License UpdatedDec 13, 2023 -
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tree-of-life Public
🌳 API for NCBI taxonomic lineages
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bio-xl Public
Tools for dealing with large (> memory) collections of nucleotide sequences
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mashtree Public
Forked from lskatz/mashtree🌳 Create a tree using Mash distances
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rust-musl-builder Public
Forked from emk/rust-musl-builderDocker images for compiling static Rust binaries using musl-libc and musl-gcc, with static versions of useful C libraries. Supports openssl and diesel crates.
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plottery Public
Procedurally Generated Pottery
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sars-cov-2 Public
Forked from onecodex/sars-cov-2SARS-CoV-2 variant calling and consensus assembly pipeline