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Contains list of software that is meant for visualizing data.pre-commit-tools
list of tools that can be used in pre-commitsProject Templates
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protein-analysis
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Contains all websites templateswork
Anything work related with image-based profilesWorking Projects
Starred repositories
The interactive graphing library for Python ✨
An implementation of the Grammar of Graphics in R
Allows the user to compare groups of data specified in a tidy pandas dataframe with ease.
Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)
Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.
Python package to perform enrichment analysis from omics data.
Searching for structural similarities across billions of molecules in milliseconds
An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.
Nextflow language support for Visual Studio Editor
An alternative approach to capture the breadth of cellular functions by performing a functional analysis of existing biological networks.
Extensible pipeline tool for processing optical pooled screens data.
Python implementations of the Boruta all-relevant feature selection method.
A Computer Science Curriculum with Rust flavor!
A highly customizable and mobile first Hugo template for personal portfolio and blog.
An open-source handbook of applied guidance and tools for sustainable software development and maintenance.
WIP: Roadmap to becoming a machine learning engineer in 2020
Use Jupyter Notebook in mkdocs
Find profile pairs and compute metrics between them.
Morphological profiling using deep learning
An extremely fast Python package and project manager, written in Rust.
Statsmodels: statistical modeling and econometrics in Python
MDAnalysis is a Python library to analyze molecular dynamics simulations.