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United Formula Annotation (UFA) for LC-HRMS data

R 8 1 Updated May 18, 2023

Examples of single-cell genomic analysis accelerated with RAPIDS

Jupyter Notebook 338 70 Updated Feb 14, 2023

Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidomics, exposomics, and environmental studies.

R 13 1 Updated Jun 1, 2023

R-based access to Mass-Spectrometry data

R 24 7 Updated Dec 20, 2024

Template repository to build PyTorch projects from source on any version of PyTorch/CUDA/cuDNN.

Dockerfile 719 43 Updated Jan 11, 2025

Facilitates searching, screening, and organizing large chemical databases

Jupyter Notebook 165 45 Updated Mar 1, 2024

Quantum mechanic mass spectrometry calculation program

Fortran 46 23 Updated Nov 20, 2024

πŸ”Ž Open source distributed and RESTful search engine.

Java 10,553 2,002 Updated Apr 24, 2025

πŸ’« Display dynamic, automatically organised, customizable network views.

JavaScript 3,237 390 Updated Apr 21, 2025

rga: ripgrep, but also search in PDFs, E-Books, Office documents, zip, tar.gz, etc.

Rust 8,696 188 Updated Mar 2, 2025

GPT-3: Language Models are Few-Shot Learners

15,757 2,302 Updated Sep 18, 2020

A set of tools to allow PDF to XML conversion, utilising Apache Beam and other tools. The aim of this project is to bring multiple tools together to generate a full XML document.

Python 294 33 Updated Mar 29, 2022

Low-code framework for building custom LLMs, neural networks, and other AI models

Python 11,430 1,205 Updated Mar 31, 2025

Repo for Harvard Medical School: BMI704, Spring 2019

10 3 Updated Feb 11, 2020

Content ExtRactor and MINEr

Java 494 100 Updated Jun 30, 2022

πŸš€ R package: future: Unified Parallel and Distributed Processing in R for Everyone

R 977 88 Updated Apr 24, 2025

User Guides for XML on the govinfo Bulk Data Repository. For information about Bill Status XML Bulk Data, see https://github.com/usgpo/bill-status.

307 112 Updated Apr 24, 2024

Retip - Retention Time prediction for metabolomics

R 33 18 Updated Jun 6, 2024

Theory: Data Mining + Cloud Computing Architecture

4 2 Updated Aug 19, 2019

How to build classification models using H2O in R

R 2 3 Updated Jul 15, 2017

Notes and code for learning Random Forests

13 11 Updated Nov 17, 2022

Fargate autoscaling pipeline for batch processing events from SQS

Shell 57 11 Updated Jan 22, 2020

A tool for the comparison and identification of candidate genes based on Venn diagrams

C++ 48 15 Updated Jun 3, 2019