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1. bioinfologics/sdg bioinfologics/sdg Public

   Sequence Distance Graph framework: graph + reads + mapping + analysis

   C++ 25 6

2. TGAC/KAT TGAC/KAT Public

   The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.

   C++ 215 50

3. bioinfologics/w2rap-contigger bioinfologics/w2rap-contigger Public

   An Illumina PE genome contig assembler, can handle large (17Gbp) complex (hexaploid) genomes.

   C++ 45 14

4. bioinfologics/satsuma2 bioinfologics/satsuma2 Public

   FFT cross-correlation based synteny aligner, (re)designed to make full use of parallel computing

   C++ 42 13