Update website

Makefile

@@ -1,19 +1,21 @@
 .PHONY: build vignettes docs
 
 version := $(shell less DESCRIPTION | grep 'Version' | sed 's/Version: \(.*\)$$/\1/')
+pkg := build/admixr_$(version).tar.gz
 
 docs:
+	rm -rf docs/reference
 	R -e 'devtools::document()'
-	R -e 'pkgdown::build_reference(examples = FALSE)'
+	R -e 'pkgdown::build_reference()'
 	R -e 'pkgdown::build_reference_index()'
+	R -e 'pkgdown::build_news()'
 
 website:
 	rm -rf docs/
 	R -e 'devtools::install(upgrade = "never")'
 	R -e 'knitr::knit("README.Rmd", output = "README.md")'
 	R -e 'devtools::document()'
-	R -e 'pkgdown::build_site(examples = FALSE)'
-#	git restore docs/pkgdown.yml
+	R -e 'pkgdown::build_site()'
 
 build: $(pkg)
 
@@ -30,15 +32,18 @@ winold: README.md
 	R -e 'devtools::check_win_oldrelease()'
 
 rhub: README.md
-	R -e 'rhub::check_for_cran()'
+	R -e 'rhub::check_for_cran(platforms = c("macos-highsierra-release", "macos-highsierra-release-cran", "macos-m1-bigsur-release"))'
 
 $(pkg): README.md
 	R -e 'devtools::document()'
-	mkdir -p build; cd build; R CMD build --log ../../admixr
+	mkdir -p build; cd build; R CMD build --log ../../slendr
 
-README.md: README.Rmd
+README.md: README.Rmd $(logo)
 	R -e 'devtools::install(upgrade = "never")'
 	R -e 'knitr::knit("README.Rmd", output = "README.md")'
 
+example_data:
+	Rscript generate_examples.R
+
 clean:
 	rm -rf build

README.Rmd

@@ -137,8 +137,8 @@ continues to be developed and maintained, _admixr_ remains relevant and useful a
 will continue to be supported. ADMIXTOOLS might have a smaller set of features than
 ADMIXTOOLS 2, but the features it provides are extremely stable. ADMIXTOOLS is one of
 the most battle-tested pieces of software in population genetics—if you're happy with
-the set of features it provides, there is no real reason to move away from it (and
-from _admixr_).
+the set of features it provides and if you're happy with _admixr_ itself, there is no
+dramatic reason to move away from either of them.
 
 ## More information
 

README.md

@@ -137,8 +137,8 @@ continues to be developed and maintained, _admixr_ remains relevant and useful a
 will continue to be supported. ADMIXTOOLS might have a smaller set of features than
 ADMIXTOOLS 2, but the features it provides are extremely stable. ADMIXTOOLS is one of
 the most battle-tested pieces of software in population genetics—if you're happy with
-the set of features it provides, there is no real reason to move away from it (and
-from _admixr_).
+the set of features it provides and if you're happy with _admixr_ itself, there is no
+dramatic reason to move away from either of them.
 
 ## More information