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Scripts for performing and visualizing PCA on the genotypes of a user-supplied dataset merged with the 1kg phase 3 genotype data. Requires plink.

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budsonjelmont/ancestry_pca

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ancestry_pca

Scripts to perform and visualize genotype PCA. Scripts are adapted from materials made available by Hannah Meyer (https://meyer-lab-cshl.github.io) where noted.

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Scripts for performing and visualizing PCA on the genotypes of a user-supplied dataset merged with the 1kg phase 3 genotype data. Requires plink.

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