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  • Depth-Finder Public

    Goofy excel spreadsheet for finding depth during 2p imaging experiments which needs to be modernized.

    ImageJ Macro Updated Jul 30, 2024

  • CalciumImagingAnalysis Public

    Forked from AbbyCui/CalciumImagingAnalysis

    Fork of CIA for publication

    Python 1 Updated Jul 8, 2024

  • Stack-Length-Finder Public

    Super simple macro to find the number of frames in a bunch of tiffs.

    ImageJ Macro Updated Jun 17, 2024

  • Suite2p-Output-Processor Public

    Process the stabilized outputs of Suite2p for manual ROI selection

    ImageJ Macro 1 Updated Jun 17, 2024

  • ThorStackSplitter Public

    This is an ImageJ macro which takes in the OME Tiffs output from ThorImageLS and does a variety of things to get them ready for image stabilization and processing.

    ImageJ Macro 2 Updated Jun 17, 2024

  • ThorSync-Processor Public

    Opens and converts ThorSync to csv

    Python Updated Jun 10, 2024

  • ROI-GUI-Labeler Public

    ImageJ Macro for helping the manual labeling of ROIs

    ImageJ Macro Updated Jan 29, 2024

  • UpSet Public

    Updated Jun 18, 2021