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3.2.1

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3.2.1: Develop (#827)
  • 3.2.1
  • 6f68c67
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@dpryan79 dpryan79 tagged this 01 Apr 20:56 
* Merged into the wrong branch without noticing :( (#814)

* use better conda link (#799)

* Estimated filtering fix (#813)

* oops

* fix testing and set a max number of filtered reads

* apparently a bunch of things were getting skipped

* fix wrappers

* update computeMatrix wrapper

* Decrease memory needs (#817)

* Use an iterator to not blow memory up

* Update a bit more

* The GC bias stuff is all deprecated, I'm not fixing that old code

* Cache resulting counts rather than just decreasing the bin size (#818)

* Cache resulting counts rather than just decreasing the bin size

* sanity check

* Implement #815

* [skip ci] update change log

* Implement #816 (#825)

* Implement #816

* expose option

* Add a test using pseudocounts and skipZeroOverZero

* syntax

* Fix tests

* Make --skipZeroOverZero a galaxy macro and add to bigwigCompare

* [ci skip] a bit of formatting

* Fix #822 (#826)
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