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Mixed Models for Repeated Measures (MMRM) in R.

R 137 24 Updated Nov 9, 2024

TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TCRs and convolutional neural networks for the prediction.

Jupyter Notebook 23 6 Updated Oct 18, 2022

Deep Learning based cell composition analysis with Scaden.

Python 75 26 Updated Nov 5, 2024

A Python package following the scikit-learn API for model-based clustering and generalized mixture modeling (latent class/profile analysis) of continuous and categorical data. StepMix handles missi…

Python 60 4 Updated Oct 8, 2024

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

Python 608 69 Updated Jan 3, 2025

🧠 A study guide to learn about Transformers

1,549 146 Updated Jun 3, 2023

ALICE (Automated Learning and Intelligence for Causation and Economics) is a Microsoft Research project aimed at applying Artificial Intelligence concepts to economic decision making. One of its go…

Jupyter Notebook 3,920 726 Updated Dec 23, 2024
Python 8 2 Updated Jul 18, 2022

R implementation of effect measure modification-extended regression-based closed-formula causal mediation analysis

R 28 5 Updated Jan 6, 2024

A temporary email right from your terminal written in POSIX sh

Shell 3,914 156 Updated Aug 17, 2024

borb is a library for reading, creating and manipulating PDF files in python.

Python 3,426 146 Updated Dec 1, 2024

LCA implementation for python

Jupyter Notebook 40 10 Updated Apr 6, 2022

Linux kernel module to control and monitor NZXT liquid coolers

C 89 14 Updated Jul 4, 2018

Create "Table 1" for research papers in Python

Python 166 41 Updated Jul 9, 2024

A flexible, intuitive and fast forecasting library

Python 1,815 106 Updated Jun 13, 2024

Pathway enrichment and expression analysis as well as species comparison tool

Java 3 6 Updated Nov 25, 2024

Package for assessment of calibration in binomial prediction models.

Jupyter Notebook 4 1 Updated Jul 6, 2024

Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code

Python 269 95 Updated Jun 17, 2021

Free monospaced font with programming ligatures

Clojure 77,793 3,117 Updated Nov 4, 2024

Reading great papers in the history of artificial intelligence and machine learning

10 1 Updated Oct 26, 2022

A formatter for Python files

Python 13,816 892 Updated Dec 30, 2024

Replication of the arterial line study in MIMIC-IV

Jupyter Notebook 65 32 Updated Oct 19, 2021

The msm R package for continuous-time multi-state modelling of panel data

R 58 18 Updated Nov 7, 2024

Data extraction for the analysis of ventilator-free-days.

TSQL 2 Updated Jun 29, 2020

Code and plots for submissions to the #tidytuesday challenge

R 710 115 Updated Jan 3, 2025

🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.

Python 137,202 27,466 Updated Jan 5, 2025
Jupyter Notebook 278 129 Updated Jun 20, 2023
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