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Add git treeshop git commit hash to methods
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rcurrie committed Nov 29, 2016
1 parent 35a07c4 commit 3cf50e1
Showing 1 changed file with 2 additions and 0 deletions.
2 changes: 2 additions & 0 deletions fabfile.py
Original file line number Diff line number Diff line change
@@ -137,8 +137,10 @@ def process(manifest, outputs="/pod/pstore/groups/treehouse/treeshop/outputs",

methods = {"user": os.environ["USER"],
"start": datetime.datetime.utcnow().isoformat(),
"treeshop_version": local("git describe --always", capture=True),
"inputs": sample_files,
"pipelines": []}

with cd("/mnt/data"):
# Copy fastqs
if (rnaseq == "True") or (fusion == "True"):

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