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Commits on Nov 6, 2020

• relion_star_printtable: made more robust (but not perfect; will be rewritten by C++ in 3.2).

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Commits on Sep 14, 2020

• eer_trajectory_handler: Supported cases when hot pixels are absent.

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Commits on Jul 27, 2020

• RelionIt: Supported EER movies

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Commits on Jul 10, 2020

• Added eer_trajectory_handler.py

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Commits on Dec 5, 2019

• bfactor_plot.py: repair twin X axes for old matplotlib

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• bfactor_plot.py: supported job.star

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Commits on Sep 12, 2019

• RelionIt: 2nd pass works now

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Commits on Sep 11, 2019

• RelionIt: fixed IniModel task

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• RelionIt: support RELION 3.1 up to Class2D (i.e. first pass is now OK)

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Commits on Sep 6, 2019

• RelionIt: support RELION 3.1 up to CTFFIND.

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Commits on Sep 5, 2019

• RelionIt: supported Python 3 (WIP: only syntax change; RELION 3.1 not supported yet)

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• bfactor_plot.py: updated for RELION 3.1 and supported Python 3.

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Commits on Jul 4, 2019

• resolve conflict merging in 3.0

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Commits on Jun 29, 2019

• bfactor.py, relion_it.py: repaired split file names (bug reported by Shaun Rawson)

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Commits on Mar 15, 2019

• RelionIt: updated load_star for 3.1 STAR files (RelionIt itself does not support 3.1 yet)

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Commits on Feb 15, 2019

• Merge branch 'master' into jaz_3.1_scheres

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Commits on Jan 30, 2019

• bfactor_plot.py: Migrated to 3.1 STAR files. Increased the number of digits.

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Commits on Jan 15, 2019

• RelionIt: fixed crash when "images_are_movies = False" (reported by Yongchan Lee)

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Commits on Nov 1, 2018

• RelionIt: original box size can be any even number (by Colin Palmer)

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Commits on Oct 30, 2018

• RelionIt: Added the mask diameter to the GUI (contribution from Colin Palmer)

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Commits on Oct 25, 2018

• RelionIt: Improved GUI, automatic suggestion of box size by Colin Palmer

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Commits on Oct 22, 2018

• RelionIt: mask size should be in angstrom, also changed the default box size

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• RelionIt: Add 'Browse' buttons & Save settings with comments (by Colin Palmer)

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Commits on Oct 17, 2018

• RelionIt: Added GUI by Colin Palmer

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Commits on Oct 1, 2018

• relion_it.py: make it more robust

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Commits on Sep 28, 2018

• relion_it: don't use GPU for the LoG picker

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Commits on Aug 16, 2018

• relion_it: retry load_star when the file is truncated.

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Commits on Aug 6, 2018

• relion_it.py: submit class2d_batch001 if not yet.

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• bfactor_plot.py: same improvement as relion_it.py

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• relion_it.py: proper parsing of SUBMITTED_JOBS. Respect extract_bg_diamer.

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Commits on Aug 3, 2018

• relion_it.py: include Colin's suggestions

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Commits on Jul 10, 2018

• changed ref-based autopicking threshold default to 0.4

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• first submit queue options then add discard_job

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Commits on Jul 2, 2018

• relion_it: now it can pick up results from continued jobs

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Commits on Jun 26, 2018

• better description of possible movie extensions

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