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outlines Public
Forked from dottxt-ai/outlinesStructured Text Generation
Python Apache License 2.0 UpdatedNov 7, 2024 -
mira Public
Forked from gyorilab/miraMIRA modeling framework
Jupyter Notebook BSD 2-Clause "Simplified" License UpdatedOct 23, 2024 -
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pyro Public
Forked from pyro-ppl/pyroDeep universal probabilistic programming with Python and PyTorch
Python Apache License 2.0 UpdatedNov 22, 2023 -
Yarrowia_lipolytica_W29-GEM Public
Forked from SysBioChalmers/Yarrowia_lipolytica_W29-GEMGenome-scale model of Yarrowia lipolytica
Jupyter Notebook Creative Commons Attribution 4.0 International UpdatedNov 15, 2023 -
py-acsets Public
Forked from AlgebraicJulia/py-acsetsA Catlab-compatible implementation of acsets in python.
Python MIT License UpdatedOct 1, 2023 -
SARS-CoV-2-variants-of-concern-in-Ontario Public
Forked from MehrshadSD/SARS-CoV-2-variants-of-concern-in-OntarioCode for this paper: https://www.nature.com/articles/s41598-022-06159-x
MATLAB UpdatedJul 9, 2023 -
experiments Public
Forked from DARPA-ASKEM/experimentssmall experiments and prototypes
Jupyter Notebook UpdatedJun 14, 2023 -
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Y0-blog Public
Reflections of a computational biologist navigating a causal universe
Jupyter Notebook Apache License 2.0 UpdatedApr 12, 2023 -
Prompt-Engineering-Guide Public
Forked from dair-ai/Prompt-Engineering-Guide🐙 Guides, papers, lecture, notebooks and resources for prompt engineering
Jupyter Notebook MIT License UpdatedApr 9, 2023 -
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DiffEqDocs.jl Public
Forked from SciML/DiffEqDocs.jlDocumentation for the DiffEq differential equations and scientific machine learning (SciML) ecosystem
Julia Other UpdatedAug 22, 2022 -
bigraph Public
Forked from prismofeverything/bigrapha python implementation of Robin Milner's bigraph formalism
Python Other UpdatedApr 8, 2022 -
cameo Public
Forked from biosustain/cameocameo - computer aided metabolic engineering & optimization
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normalization-by-evaluation Public
Forked from webyrd/normalization-by-evaluationNormalization-by-evaluation in miniKanren
Scheme MIT License UpdatedNov 16, 2021 -
cid-latex Public
Forked from causalincentives/cid-latexLatex package for drawing (causal) influence diagrams (CIDs) and labeling incentives, maintained by the Causal Incentives Working Group
TeX Apache License 2.0 UpdatedSep 30, 2021 -
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emll Public
Forked from pstjohn/emllsome code for linlog model simulation
Jupyter Notebook GNU General Public License v2.0 UpdatedSep 15, 2021 -
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yeastcyc Public
Saccharomyces cerevisae Pathway/Genome database updated with links to Yarrowia
HTML UpdatedAug 11, 2021 -
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FluxObservabilityAnalysis Public
Based on Crown & Antoniewicz, 2012
Jupyter Notebook UpdatedJul 16, 2021 -
posteriordb Public
Forked from stan-dev/posteriordbDatabase with posteriors of interest for Bayesian inference
R UpdatedJul 7, 2021 -
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psst Public
Forked from ames-market/psstPSST - Power System Simulation Toolbox
Python MIT License UpdatedApr 22, 2021