Skip to content
@eastgenomics

East Genomics

Bringing together genomic medicine across the East Midlands and East of England

Popular repositories Loading

  1. eggd_tso500 eggd_tso500 Public

    Runs the Illumina TSO500 local analysis app.

    Shell 5 2

  2. eggd_mosdepth eggd_mosdepth Public

    mosdepth (DNAnexus Platform App)

    Shell 4

  3. athena athena Public

    Provides HTML reports with detailed coverage analysis for clinical NGS data.

    HTML 4 2

  4. Ploutos Ploutos Public archive

    Code for the DNAnexus billing project.

    Python 4

  5. eggd_staraligner eggd_staraligner Public

    Shell 4

  6. eggd_generate_variant_workbook eggd_generate_variant_workbook Public

    DNAnexus app for generating xlsx variant workbooks

    Python 3

Repositories

Showing 10 of 249 repositories
  • eggd_plot_variant_baf Public

    Plots BAF and depth of variants from given VCF

    eastgenomics/eggd_plot_variant_baf’s past year of commit activity
    R 1 MIT 0 4 0 Updated Apr 10, 2025
  • eggd_conductor_configs Public

    Repository of eggd_conductor app and assay config files

    eastgenomics/eggd_conductor_configs’s past year of commit activity
    0 0 4 0 Updated Apr 10, 2025
  • eggd_generate_wgs_solid_cancer_workbook Public

    DNAnexus app to generate Excel workbook from GEL Solid Cancer WGS output

    eastgenomics/eggd_generate_wgs_solid_cancer_workbook’s past year of commit activity
    Python 0 MIT 0 2 0 Updated Apr 10, 2025
  • eggd_dias_single_workflow Public

    Workflow definition for Dias single

    eastgenomics/eggd_dias_single_workflow’s past year of commit activity
    2 0 0 0 Updated Apr 10, 2025
  • eggd_vep_uranus_config Public

    Json configuration file for the implementation of VEP for the MYE assay.

    eastgenomics/eggd_vep_uranus_config’s past year of commit activity
    0 0 0 0 Updated Apr 10, 2025
  • eggd_generate_rd_wgs_workbook Public

    DNAnexus app to generate Excel workbook from GEL RD WGS output

    eastgenomics/eggd_generate_rd_wgs_workbook’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Apr 10, 2025
  • eggd_additional_regions_calling Public
    eastgenomics/eggd_additional_regions_calling’s past year of commit activity
    0 MIT 0 0 0 Updated Apr 10, 2025
  • eggd_arriba Public
    eastgenomics/eggd_arriba’s past year of commit activity
    Shell 0 0 0 0 Updated Apr 10, 2025
  • egg5_dias_CEN_config Public
    eastgenomics/egg5_dias_CEN_config’s past year of commit activity
    2 MIT 0 0 0 Updated Apr 10, 2025
  • automated-archiving Public

    Python script to monitor archiving on DNANexus

    eastgenomics/automated-archiving’s past year of commit activity
    Python 2 0 4 0 Updated Apr 9, 2025
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…

Most used topics

Loading…