Imageomics-focused guide to collaborative work, including GitHub and Hugging Face workflows.

A community-driven ontology for the representation of environments

Sample Submission Repository for the 2024 HDR Anomaly Challenge

Computer vision benchmark for evolutionary biology-related tasks.

Open source implementation of "A Self-Supervised Descriptor for Image Copy Detection" (SSCD).

Fast Near-Duplicate Image Search and Delete using pHash, t-SNE and KDTree.

Command line program to validate and convert CITATION.cff files.

Sort through wild bugs (insects) localized from a specific location in the world to help humans id them hierarchically

Open MPI main development repository

An extremely fast Python package and project manager, written in Rust.

BIOSCAN-5M: A Multimodal Dataset for Insect Biodiversity

Simplify camera trap image analysis with ML species recognition models based around the MegaDetector model

Command line (CLI) tool to inspect Apache Parquet files on the go

An Extensible Deep Learning Library

NeurIPS 2024 Track on Datasets and Benchmarks (Spotlight)

Data & AI Notebook templates catalog organized by tools, following the IMO (input, model, output) framework for easy usage and discovery..

Tools for working with data for annotating animal behavior. These were specifically designed during construction of the KABR dataset.

Repository for Imageomics' CodaBench challenge as part of the HDR Anomaly ML Challenge.

Python package that simplifies using the BioCLIP foundation model.

Simple images from CSV downloader that runs and records checksums on downloaded image folder.

Access large archives as a filesystem efficiently, e.g., TAR, RAR, ZIP, GZ, BZ2, XZ, ZSTD archives

MPI-based distributed downloading tool for retrieving data from diverse domains.

Generate and save checksums for all (or certain) contents of given directory.

Easily turn large sets of image urls to an image dataset. Can download, resize and package 100M urls in 20h on one machine.

Humane command line arguments parser. Now with maintenance, typehints, and complete test coverage.

CoreNet: A library for training deep neural networks

A deep learning framework for multi-animal pose tracking.

Simple Windows desktop application for viewing & querying Apache Parquet files